RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 TUT1Q9H6E5 874 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 STXBP5LQ9Y2K9 1186 aa17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 WDR81Q562E7 1941 aa17.5■□□□□ 0.39
CCNDBP1-203ENST00000562553 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 CIITAP33076 1130 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 FOSBP53539 338 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 RABEP1Q15276 862 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 PRR16Q569H4 304 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 SLC17A8Q8NDX2 589 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 LENG9Q96B70 501 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
CCNDBP1-203ENST00000562553 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 C16orf59Q7L2K0 433 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 TMEM199Q8N511 208 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 WASF1Q92558 559 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 SCLYQ96I15 445 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 PCYT2Q99447 389 aa17.48■□□□□ 0.39
CCNDBP1-203ENST00000562553 A0A0C4DFX4 3053 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 RBAK-RBAKDNI3L0D1 243 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 DHX15O43143 795 aaKnown RBP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 CD2BP2O95400 341 aaKnown RBP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 CCNE2O96020 404 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 ACRP10323 421 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 XBP1P17861 261 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 ACTR2P61160 394 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 PPIGQ13427 754 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 INF2Q27J81 1249 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 WNT8BQ93098 351 aa17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
CCNDBP1-203ENST00000562553 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 LGR5O75473 907 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 TDP2O95551 362 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 MARK3P27448 753 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 HOXC8P31273 242 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 USP11P51784 963 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 KRT25Q7Z3Z0 450 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■□ 20.1
CCNDBP1-203ENST00000562553 ZNF577Q9BSK1 485 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
CCNDBP1-203ENST00000562553 EMSYQ7Z589 1322 aa17.46■□□□□ 0.38
CCNDBP1-203ENST00000562553 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 FAM205CA6NFA0 338 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 PITPNM1O00562 1244 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 MSH4O15457 936 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 NR5A1Q13285 461 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 TMEM240Q5SV17 173 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 GLG1Q92896 1179 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 GJA10Q969M2 543 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
CCNDBP1-203ENST00000562553 CCDC194A0A1B0GVG4 234 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 TREHO43280 583 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 ATG7O95352 703 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 KRT2P35908 639 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 PTK7Q13308 1070 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 BFSP2Q13515 415 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 TRIM71Q2Q1W2 868 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 KRT40Q6A162 431 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 LMBR1Q8WVP7 490 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 RNPC3Q96LT9 517 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 MBOAT7Q96N66 472 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 SMARCAD1Q9H4L7 1026 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 ERAP1Q9NZ08 941 aa17.44■□□□□ 0.38
CCNDBP1-203ENST00000562553 CYP3A7-CYP3A51PA0A087WV96 503 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 ST18O60284 1047 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 MMP1P03956 469 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 CYP3A7P24462 503 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 ADAM17P78536 824 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 RBL2Q08999 1139 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 Q4G0T1 1027 aa17.43■□□□□ 0.38
CCNDBP1-203ENST00000562553 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms