RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	MRVI1	Q9Y6F6	885 aa		11.22	□□□□□ -0.61
KNSTRN-215	ENST00000561367	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.22	□□□□□ -0.61
KNSTRN-215	ENST00000561367	DOCK3	Q8IZD9	2030 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	LRRC37A2	A6NM11	1700 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	NFASC	O94856	1347 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	FAM86B1	E9PN63	330 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	DUSP11	O75319	330 aa	Known RBP	11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	RGS20	O76081	388 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	FAM86B2	P0C5J1	330 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	NKX3-2	P78367	333 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	TNFAIP2	Q03169	654 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	BRDT	Q58F21	947 aa	Predicted RBP	11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	TTC38	Q5R3I4	469 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	MYSM1	Q5VVJ2	828 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	PLA2G4D	Q86XP0	818 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	FBXO16	Q8IX29	292 aa	Predicted RBP	11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	ZNF333	Q96JL9	665 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	ZNF396	Q96N95	335 aa	Predicted RBP	11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	RIT2	Q99578	217 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	WDR11	Q9BZH6	1224 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	SPC25	Q9HBM1	224 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	KCNH7	Q9NS40	1196 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	TCEAL9	Q9UHQ7	104 aa		11.21	□□□□□ -0.61
KNSTRN-215	ENST00000561367	IPO5	O00410	1097 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	NEMF	O60524	1076 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	GH1	P01241	217 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	TXN	P10599	105 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RARB	P10826	455 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	PRPH	P41219	470 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	LAMC2	Q13753	1193 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	PRR16	Q569H4	304 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	EARS2	Q5JPH6	523 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	METTL7B	Q6UX53	244 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SEPT14	Q6ZU15	432 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	EEPD1	Q7L9B9	569 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	METTL3	Q86U44	580 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	FERMT3	Q86UX7	667 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SH3TC2	Q8TF17	1288 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	LENG9	Q96B70	501 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SDF4	Q9BRK5	362 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	MCOLN1	Q9GZU1	580 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	IL21	Q9HBE4	155 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	KCNMB3	Q9NPA1	279 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	PAK6	Q9NQU5	681 aa	Predicted RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RTEL1	Q9NZ71	1219 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CHMP5	Q9NZZ3	219 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	DDX20	Q9UHI6	824 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	DDX41	Q9UJV9	622 aa	Known RBP	11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CFAP45	Q9UL16	551 aa		11.2	□□□□□ -0.62
KNSTRN-215	ENST00000561367	EDIL3	O43854	480 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	MARCH6	O60337	910 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	KPNA6	O60684	536 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	TDP2	O95551	362 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CNGA1	P29973	690 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ADCYAP1R1	P41586	468 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	KRT76	Q01546	638 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	DHX37	Q8IY37	1157 aa	Known RBP	11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RDM1	Q8NG50	284 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SLC5A5	Q92911	643 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ZNF577	Q9BSK1	485 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RAB34	Q9BZG1	259 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	AP5M1	Q9H0R1	490 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	AGO4	Q9HCK5	861 aa	Known RBP	11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	POLR3E	Q9NVU0	708 aa		11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	GNE	Q9Y223	722 aa	Known RBP	11.19	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ZEB2	O60315	1214 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	GJB1	P08034	283 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CCL5	P13501	91 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	KCNA2	P16389	499 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	UBA1	P22314	1058 aa	Known RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SFN	P31947	248 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	MCM7	P33993	719 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CPT1A	P50416	773 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	TOB1	P50616	345 aa	Predicted RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	GJA9	P57773	515 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	COPS2	P61201	443 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	TRIM32	Q13049	653 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CALCRL	Q16602	461 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	PRAMEF19	Q5SWL8	479 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CELF3	Q5SZQ8	465 aa	Known RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RNF180	Q86T96	592 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ARRDC4	Q8NCT1	418 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	TRPV1	Q8NER1	839 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	CYP2W1	Q8TAV3	490 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	ETNPPL	Q8TBG4	499 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	RNF208	Q9H0X6	261 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	UPF3A	Q9H1J1	476 aa	Known RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	MLXIP	Q9HAP2	919 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	JPH1	Q9HDC5	661 aa	Predicted RBP	11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	PDGFC	Q9NRA1	345 aa		11.18	□□□□□ -0.62
KNSTRN-215	ENST00000561367	KIAA1217	Q5T5P2	1943 aa		11.17	□□□□□ -0.62
KNSTRN-215	ENST00000561367	HTT	P42858	3142 aa		11.17	□□□□□ -0.62
KNSTRN-215	ENST00000561367		A6NJR5	290 aa		11.17	□□□□□ -0.62
KNSTRN-215	ENST00000561367	MSH4	O15457	936 aa		11.17	□□□□□ -0.62
KNSTRN-215	ENST00000561367	SLC37A4	O43826	429 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms