RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 IGHA2P01877 340 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 RPLP2P05387 115 aaKnown RBP12.06□□□□□ -0.48
TPM1-229ENST00000561242 RAG1P15918 1043 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
TPM1-229ENST00000561242 SYT1P21579 422 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 TMOD1P28289 359 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 TXLNAP40222 546 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
TPM1-229ENST00000561242 BFSP2Q13515 415 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 KIAA0753Q2KHM9 967 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 SWSAP1Q6NVH7 229 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 TRMT1LQ7Z2T5 733 aaKnown RBP12.06□□□□□ -0.48
TPM1-229ENST00000561242 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 CYP2W1Q8TAV3 490 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 GPR20Q99678 358 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
TPM1-229ENST00000561242 MSH4O15457 936 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 LGALS2P05162 132 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 KCNA2P16389 499 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.484e-8■■■■■ 46.2
TPM1-229ENST00000561242 MARK3P27448 753 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 DNM2P50570 870 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 RTP1P59025 263 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 NUCB2P80303 420 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
TPM1-229ENST00000561242 HAUS3Q68CZ6 603 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 NFRKBQ6P4R8 1299 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
TPM1-229ENST00000561242 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
TPM1-229ENST00000561242 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
TPM1-229ENST00000561242 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
TPM1-229ENST00000561242 HBP1O60381 514 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 ATP9AO75110 1047 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 RGS20O76081 388 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 CLTBP09497 229 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 NKX3-2P78367 333 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 SP2Q02086 613 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 ST3GAL1Q11201 340 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 PPFIA1Q13136 1202 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 STK38Q15208 465 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
TPM1-229ENST00000561242 GABBR1Q9UBS5 961 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
TPM1-229ENST00000561242 PLXNB2O15031 1838 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 MYADML2A6NDP7 307 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 M0R2N6 131 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 P4HBP07237 508 aaKnown RBP12.03□□□□□ -0.48
TPM1-229ENST00000561242 TECP42680 631 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 PSMC5P62195 406 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 PSMC6P62333 389 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 IGBP1P78318 339 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 EPHA7Q15375 998 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
TPM1-229ENST00000561242 PTGISQ16647 500 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 TRIM60Q495X7 471 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 SLC5A5Q92911 643 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 TOX2Q96NM4 488 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 MTIF3Q9H2K0 278 aaKnown RBP12.03□□□□□ -0.48
TPM1-229ENST00000561242 LRWD1Q9UFC0 647 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 NRCAMQ92823 1304 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 RLFQ13129 1914 aa12.03□□□□□ -0.48
TPM1-229ENST00000561242 IGLV3-22A0A075B6J6 115 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 UBA7P41226 1012 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 TLE2Q04725 743 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 PTGDRQ13258 359 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 CALML4Q96GE6 196 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 ZSWIM4Q9H7M6 989 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
TPM1-229ENST00000561242 MGAMO43451 1857 aa12.02□□□□□ -0.49
TPM1-229ENST00000561242 MAGEB2O15479 319 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 ADCY6O43306 1168 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 SLC37A4O43826 429 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms