RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 PRR23CQ6ZRP0 262 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
CRTC3-211ENST00000561119 APBB2Q92870 758 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
CRTC3-211ENST00000561119 ENTPD7Q9NQZ7 604 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 CCPG1Q9ULG6 757 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 PCDHGA2Q9Y5H1 932 aa11.15□□□□□ -0.62
CRTC3-211ENST00000561119 ADAMTS20P59510 1910 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 HAS3O00219 553 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 NFIBO00712 420 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 FSCN2O14926 492 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 FGF18O76093 207 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 GH1P01241 217 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 CA8P35219 290 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 ITIH3Q06033 890 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 ATAT1Q5SQI0 421 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
CRTC3-211ENST00000561119 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 PDZD3Q86UT5 571 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 THNSL1Q8IYQ7 743 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
CRTC3-211ENST00000561119 GPR152Q8TDT2 470 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 DDX1Q92499 740 aaKnown RBP11.14□□□□□ -0.63
CRTC3-211ENST00000561119 CASP10Q92851 521 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 TCF25Q9BQ70 676 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 KATNAL1Q9BW62 490 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 SUPT16HQ9Y5B9 1047 aaKnown RBP11.14□□□□□ -0.63
CRTC3-211ENST00000561119 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 AKAP13Q12802 2813 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 TTC3P53804 2025 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 RALGAPA1Q6GYQ0 2036 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
CRTC3-211ENST00000561119 F2P00734 622 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 BMP3P12645 472 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 SLFNL1Q499Z3 407 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 ZBTB44Q8NCP5 570 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 ACSF2Q96CM8 615 aaPredicted RBP11.13□□□□□ -0.63
CRTC3-211ENST00000561119 NYAP2Q9P242 653 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 PCDHB12Q9Y5F1 795 aa11.13□□□□□ -0.63
CRTC3-211ENST00000561119 IGSF10Q6WRI0 2623 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 MYH4Q9Y623 1939 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 FSD2A1L4K1 749 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 C17orf102A2RUQ5 167 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 PRB1P04280 392 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 STAT2P52630 851 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 G3BP1Q13283 466 aaKnown RBP eCLIP11.12□□□□□ -0.63
CRTC3-211ENST00000561119 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 PSAPL1Q6NUJ1 521 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 TMC5Q6UXY8 1006 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 PJA1Q8NG27 643 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 LINC01599Q8WXQ3 324 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 MAP4K1Q92918 833 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
CRTC3-211ENST00000561119 RAB23Q9ULC3 237 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
CRTC3-211ENST00000561119 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
CRTC3-211ENST00000561119 GIPC1O14908 333 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 LILRB5O75023 590 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 KCNK5O95279 499 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 CHRNA1P02708 482 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 HOXD8P13378 290 aaPredicted RBP11.11□□□□□ -0.63
CRTC3-211ENST00000561119 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 KIAA1841Q6NSI8 718 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 KCTD1Q719H9 257 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 GATA6Q92908 595 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 MEIS3Q99687 375 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 CCDC8Q9H0W5 538 aaPredicted RBP11.11□□□□□ -0.63
CRTC3-211ENST00000561119 ARHGEF3Q9NR81 526 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 RXFP3Q9NSD7 469 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
CRTC3-211ENST00000561119 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 UBE3AQ05086 875 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 LPIN1Q14693 890 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 COL28A1Q2UY09 1125 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 AASDHQ4L235 1098 aaPredicted RBP11.1□□□□□ -0.63
CRTC3-211ENST00000561119 SLC9C2Q5TAH2 1124 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 PHLDB3Q6NSJ2 640 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 RTN4RL1Q86UN2 441 aaPredicted RBP11.1□□□□□ -0.63
CRTC3-211ENST00000561119 SLC44A3Q8N4M1 653 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
CRTC3-211ENST00000561119 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
CRTC3-211ENST00000561119 MIA3Q5JRA6 1907 aa11.09□□□□□ -0.63
CRTC3-211ENST00000561119 TM4SF5O14894 197 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms