RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 PIGSQ96S52 555 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 MAP3K14Q99558 947 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 UBE2ZQ9H832 354 aaPredicted RBP12.35□□□□□ -0.43
TPM1-227ENST00000560970 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 H3BRB1 525 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 FIBPO43427 364 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 CTSHP09668 335 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 HTRA4P83105 476 aaPredicted RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 APOBRQ0VD83 1088 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
TPM1-227ENST00000560970 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 PIBF1Q8WXW3 757 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 ZNF215Q9UL58 517 aaPredicted RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
TPM1-227ENST00000560970 FNDC1Q4ZHG4 1894 aaPredicted RBP12.34□□□□□ -0.43
TPM1-227ENST00000560970 TTC3P53804 2025 aa12.33□□□□□ -0.43
TPM1-227ENST00000560970 NID2Q14112 1375 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
TPM1-227ENST00000560970 PNMA6FA0A0J9YX94 578 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 KLF18A0A0U1RQI7 1052 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 ICAM3P32942 547 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
TPM1-227ENST00000560970 NEDD9Q14511 834 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 TRIM50Q86XT4 487 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 SEPT8Q92599 483 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 BRF1Q92994 677 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 YME1L1Q96TA2 773 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
TPM1-227ENST00000560970 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
TPM1-227ENST00000560970 FAM217BQ9NTX9 383 aaPredicted RBP12.33□□□□□ -0.44
TPM1-227ENST00000560970 C5orf42Q9H799 3197 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 TREHO43280 583 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 CALM1P0DP23 149 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 CALM2P0DP24 149 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 CALM3P0DP25 149 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 GNAT1P11488 350 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 PSMA5P28066 241 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 CDC27P30260 824 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 KIF5BP33176 963 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 MRPS9P82933 396 aaKnown RBP12.32□□□□□ -0.44
TPM1-227ENST00000560970 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 PTPROQ16827 1216 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 LEXMQ3ZCV2 418 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 APBB2Q92870 758 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
TPM1-227ENST00000560970 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
TPM1-227ENST00000560970 GPR20Q99678 358 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
TPM1-227ENST00000560970 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 ZBTB43O43298 467 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 KCNA5P22460 613 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 FUT2Q10981 343 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 RTN1Q16799 776 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 PCNX4Q63HM2 1172 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
TPM1-227ENST00000560970 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
TPM1-227ENST00000560970 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
TPM1-227ENST00000560970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
TPM1-227ENST00000560970 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 GNAQP50148 359 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 FGD1P98174 961 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 XRRA1Q6P2D8 792 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 CYFIP1Q7L576 1253 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
TPM1-227ENST00000560970 CUL5Q93034 780 aa12.3□□□□□ -0.44
TPM1-227ENST00000560970 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
TPM1-227ENST00000560970 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms