RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 CUL5Q93034 780 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 ATP9AO75110 1047 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 CTSHP09668 335 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 KCNQ1P51787 676 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 SP4Q02446 784 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 FUT2Q10981 343 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 IKBKEQ14164 716 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 TMTC2Q8N394 836 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 SETD4Q9NVD3 440 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 ZNF215Q9UL58 517 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 UBIAD1Q9Y5Z9 338 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 SLC12A7Q9Y666 1083 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 NID2Q14112 1375 aa11.67□□□□□ -0.54
SNRPA1-212ENST00000560496 BRWD1Q9NSI6 2320 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 TCF7P36402 384 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 ERVK-21P61565 698 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 MGAT3Q09327 533 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 UTP14CQ5TAP6 766 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 RUFY4Q6ZNE9 571 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 CENPQQ7L2Z9 268 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 MYOCDQ8IZQ8 938 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 FANCBQ8NB91 859 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 RAD9AQ99638 391 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
SNRPA1-212ENST00000560496 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 GSTTP1A0A1W2PQM5 241 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 BMP1P13497 986 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 MTMR1Q13613 665 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 FAM26DQ5JW98 314 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 HEATR3Q7Z4Q2 680 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 CCDC82Q8N4S0 544 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 NECAB3Q96P71 396 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 TGS1Q96RS0 853 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PCYT2Q99447 389 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 C17orf80Q9BSJ5 609 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 ZBED2Q9BTP6 218 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 SUGCTQ9HAC7 445 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
SNRPA1-212ENST00000560496 NRCAMQ92823 1304 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 NCOR1O75376 2440 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 MBLAC1A4D2B0 266 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 STXBP3O00186 592 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 AMHP03971 560 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 GNAT1P11488 350 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 MARK3P27448 753 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 MARCH8Q5T0T0 291 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 RPAINQ86UA6 219 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 GIMAP8Q8ND71 665 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 NEK1Q96PY6 1258 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 PKD2L1Q9P0L9 805 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 TTC3P53804 2025 aa11.64□□□□□ -0.55
SNRPA1-212ENST00000560496 CHRNA1P02708 482 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 LINC00271P0C7V0 271 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 CDC27P30260 824 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 PPFIA1Q13136 1202 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 GRIK4Q16099 956 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 RTN1Q16799 776 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 SEPT8Q92599 483 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 ZBTB10Q96DT7 871 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 ANO3Q9BYT9 981 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 IFIH1Q9BYX4 1025 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 LMCD1Q9NZU5 365 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 TUBE1Q9UJT0 475 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 COG5Q9UP83 839 aa11.63□□□□□ -0.55
SNRPA1-212ENST00000560496 INSL6Q9Y581 213 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms