RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 HOXC8P31273 242 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 ZNF76P36508 570 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 NLRP5P59047 1200 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 NPY5RQ15761 445 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 PCYT2Q99447 389 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 SH3GLB2Q9NR46 395 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 SETD4Q9NVD3 440 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 KAT6AQ92794 2004 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 TREHO43280 583 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 CCNE2O96020 404 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 CYP3A4P08684 503 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 SELPP16109 830 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 MARK3P27448 753 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 PBX2P40425 430 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 NEK4P51957 841 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 ACTR2P61160 394 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 RBL2Q08999 1139 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 PTK7Q13308 1070 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 ME3Q16798 604 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 NIPA1Q7RTP0 329 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 SERINC5Q86VE9 423 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 PLA2G4DQ86XP0 818 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 CAGE1Q8TC20 777 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 AFAP1L1Q8TED9 768 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 SEPT1Q8WYJ6 367 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 ATP6V0A1Q93050 837 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 SLC9A2Q9UBY0 812 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 KCNJ14Q9UNX9 436 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 CHD7Q9P2D1 2997 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 MYO9BQ13459 2157 aa13.27□□□□□ -0.29
RABGGTA-216ENST00000560243 DDX39AO00148 427 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 DHX15O43143 795 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 NBNO60934 754 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 NFASCO94856 1347 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 GLG1Q92896 1179 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 LENG9Q96B70 501 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 SDF4Q9BRK5 362 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
RABGGTA-216ENST00000560243 EYSQ5T1H1 3165 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 M0R2N6 131 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 LGR5O75473 907 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 FDPSP14324 419 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 DNAJB2P25686 324 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 RFC2P35250 354 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 THPOP40225 353 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 ADAM17P78536 824 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 ST3GAL1Q11201 340 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 ANKRD1Q15327 319 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 PRR16Q569H4 304 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 BLIDQ8IZY5 108 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 KIF2CQ99661 725 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 SEMA6BQ9H3T3 888 aa13.25□□□□□ -0.29
RABGGTA-216ENST00000560243 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 IPO5O00410 1097 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 CDKL5O76039 1030 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 PFKMP08237 780 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 CIITAP33076 1130 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 RABGGTBP53611 331 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 GTF3C6Q969F1 213 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 GJA10Q969M2 543 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 ZNF577Q9BSK1 485 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 SMARCAD1Q9H4L7 1026 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
RABGGTA-216ENST00000560243 NRCAMQ92823 1304 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 JAK2O60674 1132 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms