RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 GSTTP1A0A1W2PQM5 241 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 CCDC69A6NI79 296 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 NOP56O00567 594 aaKnown RBP21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 CTSHP09668 335 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 GNAQP50148 359 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 SP4Q02446 784 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 IKBKEQ14164 716 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 WWC2Q6AWC2 1192 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 NFXL1Q6ZNB6 911 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 RUFY4Q6ZNE9 571 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 FANCBQ8NB91 859 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 PCYT2Q99447 389 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 RAD9AQ99638 391 aa21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 FAM217BQ9NTX9 383 aaPredicted RBP21.61■■□□□ 1.05
CDC42BPB-206ENST00000559790 KIF28PB7ZC32 967 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 CAND2O75155 1236 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 FAM26DQ5JW98 314 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 FAM117BQ6P1L5 589 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 TMTC2Q8N394 836 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 PSTPIP2Q9H939 334 aa21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 FNDC1Q4ZHG4 1894 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-206ENST00000559790 EFCAB14O75071 495 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 CALM1P0DP23 149 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 CALM2P0DP24 149 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 CALM3P0DP25 149 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 TCF7P36402 384 aaPredicted RBP21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 MGAT3Q09327 533 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 UTP14CQ5TAP6 766 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 CUL5Q93034 780 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 C17orf80Q9BSJ5 609 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 PLXNA4Q9HCM2 1894 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 MTUS1Q9ULD2 1270 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 SLC12A7Q9Y666 1083 aa21.59■■□□□ 1.05
CDC42BPB-206ENST00000559790 ADAMTS3O15072 1205 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 CHRNA1P02708 482 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 LINC00271P0C7V0 271 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 TSGA10IPQ3SY00 556 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 MARCH8Q5T0T0 291 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 ZBTB10Q96DT7 871 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 UHRF1Q96T88 793 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 PCDHA6Q9UN73 950 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 PCDHA8Q9Y5H6 950 aa21.58■■□□□ 1.05
CDC42BPB-206ENST00000559790 MBLAC1A4D2B0 266 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 GTPBP6O43824 516 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 ARHGAP4P98171 946 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 RPAINQ86UA6 219 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 NLRX1Q86UT6 975 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 CYP2W1Q8TAV3 490 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 PGBD1Q96JS3 809 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 TGS1Q96RS0 853 aaKnown RBP21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 ZBED2Q9BTP6 218 aa21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 ZNF215Q9UL58 517 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-206ENST00000559790 CDC27P30260 824 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 HEATR3Q7Z4Q2 680 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 MYOCDQ8IZQ8 938 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 EHMT1Q9H9B1 1298 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 RC3H2Q9HBD1 1191 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 JADE2Q9NQC1 790 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 PKD2L1Q9P0L9 805 aa21.56■■□□□ 1.04
CDC42BPB-206ENST00000559790 NRCAMQ92823 1304 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 C5orf42Q9H799 3197 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 STXBP3O00186 592 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 CLK2P49760 499 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 MTMR1Q13613 665 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 CENPQQ7L2Z9 268 aaPredicted RBP21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 NEK1Q96PY6 1258 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 NID2Q14112 1375 aa21.55■■□□□ 1.04
CDC42BPB-206ENST00000559790 AMHP03971 560 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 MARK3P27448 753 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 ITGB3BPQ13352 177 aaPredicted RBP21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 GIMAP8Q8ND71 665 aaPredicted RBP21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 LINC01599Q8WXQ3 324 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 SEPT8Q92599 483 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 KCNB2Q92953 911 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 TOP1MTQ969P6 601 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 RIC8AQ9NPQ8 531 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 LMCD1Q9NZU5 365 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 INSL6Q9Y581 213 aa21.54■■□□□ 1.04
CDC42BPB-206ENST00000559790 CPA1P15085 419 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 PPFIA1Q13136 1202 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 LPIN1Q14693 890 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 SKIV2LQ15477 1246 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 GRIK4Q16099 956 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 CRYGNQ8WXF5 182 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 SEPT1Q8WYJ6 367 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 CDHR1Q96JP9 859 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 IFIH1Q9BYX4 1025 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 KCNH7Q9NS40 1196 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 TMEM260Q9NX78 707 aa21.53■■□□□ 1.04
CDC42BPB-206ENST00000559790 SPDYE3A6NKU9 549 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 ARP10275 920 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 GHRP10912 638 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 RTN1Q16799 776 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 PPP1R18Q6NYC8 613 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 MXRA8Q9BRK3 442 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 ANO3Q9BYT9 981 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 TUBE1Q9UJT0 475 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms