RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 LRRC8DQ7L1W4 858 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 BICD2Q8TD16 824 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 TIFAQ96CG3 184 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 JPH1Q9HDC5 661 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-214ENST00000559433 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-214ENST00000559433 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 TMEM265A0A087WTH1 108 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 GNAT1P11488 350 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 SELPP16109 830 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 DNAJB2P25686 324 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 HIC1Q14526 733 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 RAB30Q15771 203 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 VWCEQ96DN2 955 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 SLC9A2Q9UBY0 812 aa14.35□□□□□ -0.11
LRRC28-214ENST00000559433 GSTTP1A0A1W2PQM5 241 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 GRXCR1A8MXD5 290 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 MEIS1O00470 390 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 DEXIO95424 95 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
LRRC28-214ENST00000559433 ARP10275 920 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 CKBP12277 381 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 RBL2Q08999 1139 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 SERINC5Q86VE9 423 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 RASGRP4Q8TDF6 673 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 ATP6V0A1Q93050 837 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 WNT8BQ93098 351 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 CDX2Q99626 313 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-214ENST00000559433 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-214ENST00000559433 AGO4Q9HCK5 861 aaKnown RBP14.34□□□□□ -0.11
LRRC28-214ENST00000559433 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 TPCN1Q9ULQ1 816 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 NFASCO94856 1347 aa14.34□□□□□ -0.11
LRRC28-214ENST00000559433 FAM86B1E9PN63 330 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 CDKL5O76039 1030 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 SEC24BO95487 1268 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 CYP3A4P08684 503 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 FAM86B2P0C5J1 330 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 ATP2A2P16615 1042 aaKnown RBP14.33□□□□□ -0.12
LRRC28-214ENST00000559433 HOXC8P31273 242 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 AK2P54819 239 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 NLRP5P59047 1200 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 SCRN1Q12765 414 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
LRRC28-214ENST00000559433 TRIM71Q2Q1W2 868 aaKnown RBP14.33□□□□□ -0.12
LRRC28-214ENST00000559433 PLA2G4DQ86XP0 818 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 GLG1Q92896 1179 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 GUCD1Q96NT3 240 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 RNPEPQ9H4A4 650 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 ZNF576Q9H609 170 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 SETD4Q9NVD3 440 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 A0A0C4DFX4 3053 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 PTPRSQ13332 1948 aa14.33□□□□□ -0.12
LRRC28-214ENST00000559433 KIF28PB7ZC32 967 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 DDX39AO00148 427 aaKnown RBP14.32□□□□□ -0.12
LRRC28-214ENST00000559433 TREHO43280 583 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 PFKFB2O60825 505 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 MARK3P27448 753 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 THPOP40225 353 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 PBX2P40425 430 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 KCNJ6P48051 423 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 ACTR2P61160 394 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 SETQ01105 290 aaPredicted RBP14.32□□□□□ -0.12
LRRC28-214ENST00000559433 ZNF618Q5T7W0 954 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 CRYGNQ8WXF5 182 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 IL17RAQ96F46 866 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 PBX4Q9BYU1 374 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
LRRC28-214ENST00000559433 SMARCAD1Q9H4L7 1026 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 AZI2Q9H6S1 392 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 WDR81Q562E7 1941 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 MYH9P35579 1960 aaKnown RBP14.32□□□□□ -0.12
LRRC28-214ENST00000559433 EMSYQ7Z589 1322 aa14.32□□□□□ -0.12
LRRC28-214ENST00000559433 CDH23Q9H251 3354 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 NBNO60934 754 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 FOSL2P15408 326 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 MYLIPQ8WY64 445 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
LRRC28-214ENST00000559433 AIFM3Q96NN9 605 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-214ENST00000559433 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
LRRC28-214ENST00000559433 SIP14410 1827 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 COL6A3P12111 3177 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 RSPH10B2B2RC85 870 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 IPO5O00410 1097 aaKnown RBP14.3□□□□□ -0.12
LRRC28-214ENST00000559433 ABCB7O75027 752 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 LGR5O75473 907 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms