RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 TMOD1P28289 359 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 FKBP3Q00688 224 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 AGXT2Q9BYV1 514 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 EHD4Q9H223 541 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 CNOT10Q9H9A5 744 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 MAP2K7O14733 419 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ALX1Q15699 326 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 CROCCP2Q86T23 111 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 STAG2Q8N3U4 1231 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 TAF1DQ9H5J8 278 aaPredicted RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 RIC8AQ9NPQ8 531 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PCDHA6Q9UN73 950 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP3-210ENST00000559192 PCDHA8Q9Y5H6 950 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 DIP2BQ9P265 1576 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PHF20L1A8MW92 1017 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 SUN1O94901 812 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 BCRP11274 1271 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 SLC16A2P36021 539 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PDXDC1Q6P996 788 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 KLHL29Q96CT2 875 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 MYO5BQ9ULV0 1848 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 A0A087X0B3 334 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 OPHN1O60890 802 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PPFIA2O75334 1257 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ABL1P00519 1130 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PCP11498 1178 aaKnown RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 BMP6P22004 513 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 BTDP43251 543 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 TAB3Q8N5C8 712 aaPredicted RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 RAB21Q9UL25 225 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 SNX24Q9Y343 169 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 NOC2LQ9Y3T9 749 aaKnown RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 TCHHQ07283 1943 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 XDHP47989 1333 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PDS5AQ29RF7 1337 aaKnown RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 LRRC63Q05C16 580 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ZNF211Q13398 564 aaPredicted RBP7.73□□□□□ -1.17
USP3-210ENST00000559192 FAM83BQ5T0W9 1011 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 CXorf38Q8TB03 319 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 NEK9Q8TD19 979 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 PIGBQ92521 554 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ISCA1Q9BUE6 129 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 ATP8A2Q9NTI2 1148 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 COMMD10Q9Y6G5 202 aa7.73□□□□□ -1.17
USP3-210ENST00000559192 TAF11Q15544 211 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 TBC1D10BQ4KMP7 808 aaPredicted RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 UNC13DQ70J99 1090 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 SYNCQ9H7C4 482 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 TMOD2Q9NZR1 351 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 SPATA31D1Q6ZQQ2 1576 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 GNPATO15228 680 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 DAPK3O43293 454 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 LRRC14Q15048 493 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 ALKBH5Q6P6C2 394 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 KIFAP3Q92845 792 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 VCX3AQ9NNX9 186 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 STK17AQ9UEE5 414 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 BZW2Q9Y6E2 419 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 CAPN6Q9Y6Q1 641 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 RAD51CO43502 376 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 MGEA5O60502 916 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 PRPF6O94906 941 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 ACSL3O95573 720 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 MDM2Q00987 491 aaPredicted RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 TMED1Q13445 227 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 CLUL1Q15846 466 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 KCTD1Q719H9 257 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 DPH6Q7L8W6 267 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 ARMC9Q7Z3E5 817 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP3-210ENST00000559192 ELOA2Q8IYF1 753 aaPredicted RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 PASKQ96RG2 1323 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 GOLPH3Q9H4A6 298 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 SLC40A1Q9NP59 571 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 AMACRQ9UHK6 382 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 GRID2IPA4D2P6 1211 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 ARHGEF35A5YM69 484 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 SYF2O95926 243 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 CRKLP46109 303 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 MYL7Q01449 175 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 SP4Q02446 784 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 TCP10Q12799 353 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 STK4Q13043 487 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 COASYQ13057 564 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 TMED2Q15363 201 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 PTGISQ16647 500 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 CDKAL1Q5VV42 579 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
USP3-210ENST00000559192 HDAC7Q8WUI4 952 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 RAD54LQ92698 747 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 CYFIP2Q96F07 1278 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 DNAJC7Q99615 494 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 FAM167BQ9BTA0 163 aa7.72□□□□□ -1.17
USP3-210ENST00000559192 LACRTQ9GZZ8 138 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms