RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 VPS54Q9P1Q0 977 aa13.75□□□□□ -0.21
TPM1-216ENST00000558910 PIK3CDO00329 1044 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 KPNA6O60684 536 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 SCG2P13521 617 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 PTGISQ16647 500 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 GDF6Q6KF10 455 aaPredicted RBP13.74□□□□□ -0.21
TPM1-216ENST00000558910 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 CYP2W1Q8TAV3 490 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
TPM1-216ENST00000558910 ANO3Q9BYT9 981 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
TPM1-216ENST00000558910 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
TPM1-216ENST00000558910 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 ZBBXA8MT70 800 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 SPATA31C2B4DYI2 1134 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
TPM1-216ENST00000558910 FIBPO43427 364 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 ATP9AO75110 1047 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 PTPN5P54829 565 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
TPM1-216ENST00000558910 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.21
TPM1-216ENST00000558910 PFKFB3Q16875 520 aaPredicted RBP13.73□□□□□ -0.21
TPM1-216ENST00000558910 KCNV1Q6PIU1 500 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 INPP4AQ96PE3 977 aaPredicted RBP13.73□□□□□ -0.21
TPM1-216ENST00000558910 NOC4LQ9BVI4 516 aaKnown RBP13.73□□□□□ -0.21
TPM1-216ENST00000558910 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 LTBP2Q14767 1821 aa13.73□□□□□ -0.21
TPM1-216ENST00000558910 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 GRXCR1A8MXD5 290 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
TPM1-216ENST00000558910 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 ITGB5P18084 799 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 MARK3P27448 753 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 MTMR1Q13613 665 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 NEDD9Q14511 834 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 PKN1Q16512 942 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 C16orf59Q7L2K0 433 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
TPM1-216ENST00000558910 WNT8AQ9H1J5 351 aa13.72□□□□□ -0.21
TPM1-216ENST00000558910 LGALS2P05162 132 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 ARP10275 920 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 AK2P54819 239 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 NLRP5P59047 1200 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 NTRK3Q16288 839 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 LRIT3Q3SXY7 679 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 FAM109BQ6ICB4 259 aaPredicted RBP13.71□□□□□ -0.21
TPM1-216ENST00000558910 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 GPR20Q99678 358 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 AGXT2Q9BYV1 514 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
TPM1-216ENST00000558910 C6orf50Q9HD87 102 aa13.71□□□□□ -0.21
TPM1-216ENST00000558910 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 STAM2O75886 525 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 TGFB3P10600 412 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 IFNAR1P17181 557 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 ICAM3P32942 547 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 RCAN1P53805 252 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 HIC1Q14526 733 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 METTL7BQ6UX53 244 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 TRMT1LQ7Z2T5 733 aaKnown RBP13.7□□□□□ -0.22
TPM1-216ENST00000558910 EMID1Q96A84 441 aaPredicted RBP13.7□□□□□ -0.22
TPM1-216ENST00000558910 MXRA8Q9BRK3 442 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
TPM1-216ENST00000558910 H3BRB1 525 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 EPB41L2O43491 1005 aaKnown RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 F2P00734 622 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 FGBP02675 491 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 KCNA2P16389 499 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 TCF7P36402 384 aaPredicted RBP13.69□□□□□ -0.22
TPM1-216ENST00000558910 NEK4P51957 841 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 IGBP1P78318 339 aa13.69□□□□□ -0.22
TPM1-216ENST00000558910 ARHGAP4P98171 946 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms