RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 UBXN2AP68543 259 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 SETQ01105 290 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-211ENST00000558890 MYL5Q02045 173 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 PPP4R3AQ6IN85 833 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 TAPT1Q6NXT6 567 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 KCNV1Q6PIU1 500 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 ANKRD35Q8N283 1001 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 CDHR1Q96JP9 859 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 MBOAT7Q96N66 472 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 ANO3Q9BYT9 981 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.63□□□□□ -1.03
LRRC28-211ENST00000558890 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 FBXO2Q9UK22 296 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-211ENST00000558890 OGDHLQ9ULD0 1010 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 PCDHA6Q9UN73 950 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 PCDHA8Q9Y5H6 950 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 hCG_1642624A0A1W2PR95 340 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 ADAMTS3O15072 1205 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 CFBP00751 764 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 TGFB3P10600 412 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 ALDH5A1P51649 535 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 SOX10P56693 466 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 NKX3-2P78367 333 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 POSTNQ15063 836 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 TMEM63BQ5T3F8 832 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 MFSD14CQ5VZR4 134 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 NSMFQ6X4W1 530 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 ARMCX2Q7L311 632 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 C17orf53Q8N3J3 647 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 TRIML1Q8N9V2 468 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 U2AF1L4Q8WU68 220 aaKnown RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 ERCC4Q92889 916 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 FERMT2Q96AC1 680 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 CLIC6Q96NY7 704 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 TAAR1Q96RJ0 339 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 MAP7D2Q96T17 732 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 PDCD2LQ9BRP1 358 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 PYM1Q9BRP8 204 aaKnown RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 PXMP2Q9NR77 195 aa8.62□□□□□ -1.03
LRRC28-211ENST00000558890 SRPRBQ9Y5M8 271 aaKnown RBP8.62□□□□□ -1.03
LRRC28-211ENST00000558890 A0A087WWV3 80 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 SEPT4O43236 478 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 EDIL3O43854 480 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 RGS20O76081 388 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 COL6A1P12109 1028 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 ATP2B1P20020 1258 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 CCND2P30279 289 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 ICAM3P32942 547 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 PRPHP41219 470 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 TOB1P50616 345 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 LRMPQ12912 555 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 NR5A1Q13285 461 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 PGM5Q15124 567 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 GNPTABQ3T906 1256 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 Q4G0T1 1027 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 ARL6IP4Q66PJ3 421 aaKnown RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 MTERF4Q7Z6M4 381 aaKnown RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 MYRIPQ8NFW9 859 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 SMARCE1Q969G3 411 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 GPRASP2Q96D09 838 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 INPP4AQ96PE3 977 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 DEFB118Q96PH6 123 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 VTA1Q9NP79 307 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 BIN2Q9UBW5 565 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 GNEQ9Y223 722 aaKnown RBP8.61□□□□□ -1.03
LRRC28-211ENST00000558890 PCDHB6Q9Y5E3 794 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 MCM3APO60318 1980 aa8.61□□□□□ -1.03
LRRC28-211ENST00000558890 LOXHD1Q8IVV2 1947 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 SLC26A4O43511 780 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 EIF3JO75822 258 aaKnown RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 SERPINC1P01008 464 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 NR3C2P08235 984 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 NUBP1P53384 320 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 PNOCQ13519 176 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 STXBP2Q15833 593 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 TPD52L1Q16890 204 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 CCDC144BQ3MJ40 725 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 USP17L6PQ6QN14 398 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 TMC6Q7Z403 805 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 NLRX1Q86UT6 975 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 VSIG10LQ86VR7 867 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms