RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLIRP-209ENST00000557342 BFSP2Q13515 415 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-209ENST00000557342 TDHQ8IZJ6 230 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 CCDC155Q8N6L0 562 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 NAP1L4Q99733 375 aaKnown RBP14.17□□□□□ -0.14
SLIRP-209ENST00000557342 NOC4LQ9BVI4 516 aaKnown RBP14.17□□□□□ -0.14
SLIRP-209ENST00000557342 PPP1R12CQ9BZL4 782 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
SLIRP-209ENST00000557342 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 CYP3A7-CYP3A51PA0A087WV96 503 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 DTNBO60941 627 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 MMP1P03956 469 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 GNAT1P11488 350 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 CYP3A7P24462 503 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 ACTR2P61160 394 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 SAFBQ15424 915 aaKnown RBP eCLIP14.16□□□□□ -0.14
SLIRP-209ENST00000557342 Q4G0T1 1027 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 NEK8Q86SG6 692 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 RETREG2Q8NC44 543 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 PPP1R13LQ8WUF5 828 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 GLG1Q92896 1179 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
SLIRP-209ENST00000557342 AZI2Q9H6S1 392 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 GJB4Q9NTQ9 266 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 ERAP1Q9NZ08 941 aa14.16□□□□□ -0.14
SLIRP-209ENST00000557342 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 DDX39AO00148 427 aaKnown RBP14.15□□□□□ -0.14
SLIRP-209ENST00000557342 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 EDIL3O43854 480 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 LGR5O75473 907 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 ATG7O95352 703 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 SMIM10L2AP0DMW4 78 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 SMIM10L2BP0DMW5 78 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 CYP2C9P11712 490 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
SLIRP-209ENST00000557342 CYP2C18P33260 490 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 KRT76Q01546 638 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 INF2Q27J81 1249 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 KRT40Q6A162 431 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-209ENST00000557342 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 SMAP1Q8IYB5 467 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-209ENST00000557342 LENG9Q96B70 501 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
SLIRP-209ENST00000557342 SCN5AQ14524 2016 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
SLIRP-209ENST00000557342 SLC26A2P50443 739 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 STAT5BP51692 787 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 PTK7Q13308 1070 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 LETM2Q2VYF4 491 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 PPP4R3AQ6IN85 833 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 MIS18BP1Q6P0N0 1132 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 PLPPR4Q7Z2D5 763 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
SLIRP-209ENST00000557342 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
SLIRP-209ENST00000557342 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 ATP6V0A1Q93050 837 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 TMX3Q96JJ7 454 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 MBOAT7Q96N66 472 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 RIT2Q99578 217 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
SLIRP-209ENST00000557342 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
SLIRP-209ENST00000557342 IGKV6D-21A0A0A0MT36 114 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 MSH4O15457 936 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 GAS7O60861 476 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
SLIRP-209ENST00000557342 TDP2O95551 362 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 CCNE2O96020 404 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 PFKMP08237 780 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 CSF2RAP15509 400 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 HOXC8P31273 242 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 RFC2P35250 354 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 FOSBP53539 338 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 CCL23P55773 120 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 NR5A1Q13285 461 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 LRCH2Q5VUJ6 765 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 ABHD15Q6UXT9 468 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 TNFRSF25Q93038 417 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 TEKT3Q9BXF9 490 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 IL23AQ9NPF7 189 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 UMODL1Q5DID0 1318 aa14.13□□□□□ -0.15
SLIRP-209ENST00000557342 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
SLIRP-209ENST00000557342 BACH1O14867 736 aa14.12□□□□□ -0.15
SLIRP-209ENST00000557342 CCNT1O60563 726 aaKnown RBP14.12□□□□□ -0.15
SLIRP-209ENST00000557342 CD2BP2O95400 341 aaKnown RBP14.12□□□□□ -0.15
SLIRP-209ENST00000557342 PSAPP07602 524 aa14.12□□□□□ -0.15
SLIRP-209ENST00000557342 MARK3P27448 753 aa14.12□□□□□ -0.15
SLIRP-209ENST00000557342 SFNP31947 248 aa14.12□□□□□ -0.15
SLIRP-209ENST00000557342 RBL2Q08999 1139 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms