RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 JPH1Q9HDC5 661 aaPredicted RBP11.82□□□□□ -0.52
SNX6-208ENST00000556712 SH3GLB2Q9NR46 395 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 PTPRSQ13332 1948 aa11.82□□□□□ -0.52
SNX6-208ENST00000556712 MEIS1O00470 390 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 EDIL3O43854 480 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 CYP3A4P08684 503 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
SNX6-208ENST00000556712 PSRC1Q6PGN9 363 aaPredicted RBP11.81□□□□□ -0.52
SNX6-208ENST00000556712 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 Q7L0L9 218 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 BLIDQ8IZY5 108 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
SNX6-208ENST00000556712 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
SNX6-208ENST00000556712 SDF4Q9BRK5 362 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 IL23AQ9NPF7 189 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
SNX6-208ENST00000556712 SLC9A2Q9UBY0 812 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 PCDHA4Q9UN74 947 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 WDR81Q562E7 1941 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
SNX6-208ENST00000556712 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 M0R2N6 131 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 CCNE2O96020 404 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
SNX6-208ENST00000556712 PRR16Q569H4 304 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 OTOP2Q7RTS6 562 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 DAGLBQ8NCG7 672 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 TBCKQ8TEA7 893 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 LENG9Q96B70 501 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 PCYT2Q99447 389 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 ZNF215Q9UL58 517 aaPredicted RBP11.8□□□□□ -0.52
SNX6-208ENST00000556712 KAT6AQ92794 2004 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 NFASCO94856 1347 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 EMSYQ7Z589 1322 aa11.8□□□□□ -0.52
SNX6-208ENST00000556712 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 MAFGO15525 162 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 TREHO43280 583 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 TDP2O95551 362 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 IQCF3P0C7M6 154 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 HOXC8P31273 242 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
SNX6-208ENST00000556712 ACTR2P61160 394 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
SNX6-208ENST00000556712 BFSP2Q13515 415 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 TRIM71Q2Q1W2 868 aaKnown RBP11.79□□□□□ -0.52
SNX6-208ENST00000556712 MCTP2Q6DN12 878 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 CCDC155Q8N6L0 562 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 LMBR1Q8WVP7 490 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 GLG1Q92896 1179 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 ATP6V0A1Q93050 837 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 GJA10Q969M2 543 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
SNX6-208ENST00000556712 CXXC1Q9P0U4 656 aaPredicted RBP11.79□□□□□ -0.52
SNX6-208ENST00000556712 FAM205CA6NFA0 338 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 GRXCR1A8MXD5 290 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
SNX6-208ENST00000556712 DHX15O43143 795 aaKnown RBP11.78□□□□□ -0.52
SNX6-208ENST00000556712 LGR5O75473 907 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 CTSHP09668 335 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 CKBP12277 381 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 CIITAP33076 1130 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 RBL2Q08999 1139 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 PTK7Q13308 1070 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 GPNMBQ14956 572 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 INF2Q27J81 1249 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 LRRC8DQ7L1W4 858 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
SNX6-208ENST00000556712 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
SNX6-208ENST00000556712 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
SNX6-208ENST00000556712 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 MSH4O15457 936 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 FGBP02675 491 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 SELPP16109 830 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 THPOP40225 353 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 IGBP1P78318 339 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 PPFIA1Q13136 1202 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 NR5A1Q13285 461 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 MBTPS1Q14703 1052 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 NONOQ15233 471 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNX6-208ENST00000556712 GRIK4Q16099 956 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 EARS2Q5JPH6 523 aaKnown RBP11.77□□□□□ -0.53
SNX6-208ENST00000556712 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 RUFY4Q6ZNE9 571 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 TRAPPC12Q8WVT3 735 aa11.77□□□□□ -0.53
SNX6-208ENST00000556712 HERVK_113Q902F9 699 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms