RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TELO2Q9Y4R8 837 aa6.07□□□□□ -1.44
SCFD1-219ENST00000556413 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 ZNF623O75123 536 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 CNOT4O95628 575 aaKnown RBP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 ACVRL1P37023 503 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 GDF5P43026 501 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 SELENOPP49908 381 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 ARID5AQ03989 594 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 NTRK3Q16288 839 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 DDR2Q16832 855 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 SKIDA1Q1XH10 827 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 KIZQ2M2Z5 673 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 HABP4Q5JVS0 413 aaKnown RBP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 Q8TCH9 128 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 SGSM3Q96HU1 749 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 AJUBAQ96IF1 538 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 KCNJ15Q99712 375 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 AARSD1Q9BTE6 412 aaKnown RBP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 ZFP69BQ9UJL9 534 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 R3HCC1Q9Y3T6 440 aaKnown RBP6.06□□□□□ -1.44
SCFD1-219ENST00000556413 TCAF1Q9Y4C2 921 aa6.06□□□□□ -1.44
SCFD1-219ENST00000556413 PRODHO43272 600 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 SUV39H1O43463 412 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 FBXO21O94952 628 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 AMHP03971 560 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 GNAT1P11488 350 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 GLRBP48167 497 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 PFKPQ01813 784 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 SPIRE1Q08AE8 756 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 CD276Q5ZPR3 534 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 OSBP2Q969R2 916 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 ZFYVE21Q9BQ24 234 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 VPS11Q9H270 941 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 ARHGEF4Q9NR80 690 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 KCND1Q9NSA2 647 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 ARHGAP20Q9P2F6 1191 aa6.05□□□□□ -1.44
SCFD1-219ENST00000556413 MUSKO15146 869 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 SLPIP03973 132 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 ENO2P09104 434 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-219ENST00000556413 FGFR1P11362 822 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 CSF2RBP32927 897 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 ANKS3Q6ZW76 656 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 GPR155Q7Z3F1 870 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-219ENST00000556413 ZFPM1Q8IX07 1006 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 GNRHR2Q96P88 292 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 SEC61A2Q9H9S3 476 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 DSEQ9UL01 958 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 TESMINQ9Y4I5 508 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
SCFD1-219ENST00000556413 BLACEA4D250 179 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 ACOT7O00154 380 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 CYR61O00622 381 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 FZD7O75084 574 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 IL18BPO95998 194 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 SOD2P04179 222 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 PABPC1P11940 636 aaKnown RBP6.03□□□□□ -1.44
SCFD1-219ENST00000556413 TCF3P15923 654 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 DNAJA1P31689 397 aaKnown RBP6.03□□□□□ -1.44
SCFD1-219ENST00000556413 EPHA5P54756 1037 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 GPR85P60893 370 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 STYK1Q6J9G0 422 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 TCTN3Q6NUS6 607 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 KATNBL1Q9H079 304 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 SEMA4AQ9H3S1 761 aa6.03□□□□□ -1.44
SCFD1-219ENST00000556413 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 ZNF839A8K0R7 811 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 KLF4O43474 513 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 FOXS1O43638 330 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 HMGA2P52926 109 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 NSMFQ6X4W1 530 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 KCTD1Q719H9 257 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 IFNL3Q8IZI9 196 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCFD1-219ENST00000556413 PTPN22Q9Y2R2 807 aa6.02□□□□□ -1.45
SCFD1-219ENST00000556413 H0Y858 1186 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 YOD1Q5VVQ6 348 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-219ENST00000556413 REXO1L1PQ8IX06 675 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 LRRC37BQ96QE4 947 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 LMF1Q96S06 567 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 TACO1Q9BSH4 297 aaKnown RBP6.01□□□□□ -1.45
SCFD1-219ENST00000556413 MRIQ9BWK5 157 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 IPPKQ9H8X2 491 aa6.01□□□□□ -1.45
SCFD1-219ENST00000556413 ASXL2Q76L83 1435 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 TCRBV5S4A2TA0A5A2 114 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 FAM47E-STBD1D6RA91 191 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 ZNF888P0CJ79 500 aaPredicted RBP6□□□□□ -1.45
SCFD1-219ENST00000556413 IFRD2Q12894 506 aaPredicted RBP6□□□□□ -1.45
SCFD1-219ENST00000556413 USP51Q70EK9 711 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 IFNL2Q8IZJ0 200 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 ST13P5Q8NFI4 369 aaPredicted RBP6□□□□□ -1.45
SCFD1-219ENST00000556413 SH3RF2Q8TEC5 729 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 GMLQ99445 158 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 CD244Q9BZW8 370 aa6□□□□□ -1.45
SCFD1-219ENST00000556413 ZFR2Q9UPR6 939 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms