RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 TRIM50Q86XT4 487 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 LMBR1Q8WVP7 490 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 PIGSQ96S52 555 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 RALGAPA2Q2PPJ7 1873 aa13.18□□□□□ -0.3
CCDC85C-205ENST00000556348 ADGRA3Q8IWK6 1321 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 NRCAMQ92823 1304 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 HIP1O00291 1037 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 FIBPO43427 364 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 CHRNA1P02708 482 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 ICAM3P32942 547 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 NDUFV1P49821 464 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 RSPH3Q86UC2 560 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 PPP2R3CQ969Q6 453 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
CCDC85C-205ENST00000556348 PNMA6FA0A0J9YX94 578 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 ENPP3O14638 875 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 TRDNQ13061 729 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 SEC23AQ15436 765 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-205ENST00000556348 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 ERICH2A1L162 156 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 LINC01565O15544 149 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 TBX10O75333 385 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 MMP1P03956 469 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 ADAM17P78536 824 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 ADAM15Q13444 863 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 LPIN1Q14693 890 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 GRM4Q14833 912 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 GIMAP8Q8ND71 665 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 EDAQ92838 391 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 CLP1Q92989 425 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 CUL5Q93034 780 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 PBXIP1Q96AQ6 731 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
CCDC85C-205ENST00000556348 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 DGKIO75912 1065 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 MARK3P27448 753 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 TCF7P36402 384 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 SUGP1Q8IWZ8 645 aaKnown RBP13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 DNAJB3Q8WWF6 145 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
CCDC85C-205ENST00000556348 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 M0R296 226 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 CYTH3O43739 400 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 PTPN5P54829 565 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 IGBP1P78318 339 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 GRIK4Q16099 956 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 FBXO47Q5MNV8 452 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 PCNX4Q63HM2 1172 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 XRRA1Q6P2D8 792 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 TSHZ1Q6ZSZ6 1077 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 TRIM67Q6ZTA4 783 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 GLG1Q92896 1179 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 P2RX5Q93086 422 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 CDY2AQ9Y6F7 541 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
CCDC85C-205ENST00000556348 ATG2AQ2TAZ0 1938 aa13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 M0QZ92 97 aa13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 MGAT3Q09327 533 aa13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 WTAPQ15007 396 aa13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 PKN1Q16512 942 aa13.12□□□□□ -0.31
CCDC85C-205ENST00000556348 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms