RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 KIAA0232Q92628 1395 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 CLTCL1P53675 1640 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 CENPFP49454 3210 aa4.5□□□□□ -1.69
EFCAB11-210ENST00000556078 NRXN1Q9ULB1 1477 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 LY75O60449 1722 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 IGSF1Q8N6C5 1336 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 HFM1A2PYH4 1435 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 C10orf71Q711Q0 1435 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 PRPF40AO75400 957 aaKnown RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 CLEC3AO75596 197 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 BRD1O95696 1058 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 AMHP03971 560 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 GSNP06396 782 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 TSPY4P0CV99 314 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 TSPY10P0CW01 314 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 POLD1P28340 1107 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 PMLP29590 882 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 SOX10P56693 466 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 PURAQ00577 322 aaKnown RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 KCNA1Q09470 495 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 TAF1CQ15572 869 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 RGL3Q3MIN7 710 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 FAM26FQ5R3K3 315 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 BORAQ6PGQ7 559 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 CRTC3Q6UUV7 619 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 CYP2R1Q6VVX0 501 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 SMIM5Q71RC9 77 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 C16orf71Q8IYS4 520 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 NAT16Q8N8M0 369 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 SMARCC2Q8TAQ2 1214 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 RHOVQ96L33 236 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 SRRTQ9BXP5 876 aaKnown RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 KLC2Q9H0B6 622 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 RRP7BPQ9NSQ0 103 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 GFOD1Q9NXC2 390 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 GMIPQ9P107 970 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 DBR1Q9UK59 544 aaKnown RBP4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 TNFRSF18Q9Y5U5 241 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 COL18A1P39060 1754 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 SBNO1A3KN83 1393 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 KIF15Q9NS87 1388 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 PLEKHH1Q9ULM0 1364 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 ITSN1Q15811 1721 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 TOGARAM1Q9Y4F4 1720 aa4.49□□□□□ -1.69
EFCAB11-210ENST00000556078 THSD7BQ9C0I4 1608 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 MEIS1O00470 390 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 GLI4P10075 376 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 CACNB2Q08289 660 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 SMN1Q16637 294 aaKnown RBP4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 LIMS2Q7Z4I7 341 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 FAM124AQ86V42 546 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 RGS22Q8NE09 1264 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 SLC12A9Q9BXP2 914 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 CD248Q9HCU0 757 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 PCDHB12Q9Y5F1 795 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 TAF1LQ8IZX4 1826 aa4.48□□□□□ -1.69
EFCAB11-210ENST00000556078 ZNF536O15090 1300 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 CEP162Q5TB80 1403 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 TIAM2Q8IVF5 1701 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 E9PSI1 815 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 ATE1O95260 518 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 RPL13P26373 211 aaKnown RBP4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 ICAM4Q14773 271 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 SLC9A5Q14940 896 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 SURF1Q15526 300 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 CCDC27Q2M243 656 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 TCP11L2Q8N4U5 519 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 SMC1BQ8NDV3 1235 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 ZBTB8AQ96BR9 441 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 CNNM2Q9H8M5 875 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 IVNS1ABPQ9Y6Y0 642 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 ARHGEF10O15013 1369 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 CNTNAP1P78357 1384 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 KANK1Q14678 1352 aa4.47□□□□□ -1.69
EFCAB11-210ENST00000556078 RANBP2P49792 3224 aaKnown RBP4.46□□□□□ -1.69
EFCAB11-210ENST00000556078 PPLO60437 1756 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 USP31Q70CQ4 1352 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 MROH6A6NGR9 719 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 FGF10O15520 208 aaPredicted RBP4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 SMARCA5O60264 1052 aaPredicted RBP4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 GSTM1P09488 218 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 POLR2BP30876 1174 aaKnown RBP4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 ZC3H6P61129 1189 aaKnown RBP4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 TGFB2P61812 414 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 DNERQ8NFT8 737 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 ZNF428Q96B54 188 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 ZNF512BQ96KM6 892 aaPredicted RBP4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 TMEM74Q96NL1 305 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 TRPM1Q7Z4N2 1603 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 MUC3AQ02505 3323 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 LTBP3Q9NS15 1303 aa4.46□□□□□ -1.7
EFCAB11-210ENST00000556078 TACR1P25103 407 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 AUHQ13825 339 aaKnown RBP4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 C9orf131Q5VYM1 1079 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 OVOS1Q6IE37 1185 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 COL23A1Q86Y22 540 aaPredicted RBP4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 RSRP1Q9BUV0 290 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 MKRN2Q9H000 416 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms