RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ACTN1P12814 892 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MYOGP15173 224 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 CD46P15529 392 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 ATP2A2P16615 1042 aaKnown RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 IGFBP4P22692 258 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 CCND2P30279 289 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 ANTXR2P58335 489 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PTPN11Q06124 597 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 TROAPQ12815 778 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 TRAF1Q13077 416 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 BFSP2Q13515 415 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 LAMC2Q13753 1193 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PGM5Q15124 567 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 SLC35G1Q2M3R5 365 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 GDF6Q6KF10 455 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 CASC1Q6TDU7 716 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 NFXL1Q6ZNB6 911 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 C7orf31Q8N865 590 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 IL31RAQ8NI17 732 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 CTCFLQ8NI51 663 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MAP4K1Q92918 833 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MTMR8Q96EF0 704 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PDCD2LQ9BRP1 358 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 ALG1Q9BT22 464 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MYL10Q9BUA6 226 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 RIOX1Q9H6W3 641 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MAP3K20Q9NYL2 800 aaKnown RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 YBX2Q9Y2T7 364 aaKnown RBP7.74□□□□□ -1.17
PSEN1-216ENST00000556066 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 PTPRSQ13332 1948 aa7.74□□□□□ -1.17
PSEN1-216ENST00000556066 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 PRC1O43663 620 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 RNF40O75150 1001 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 GGPS1O95749 300 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 RFC2P35250 354 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 CCDC85BQ15834 202 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 SWT1Q5T5J6 900 aaKnown RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 MB21D2Q8IYB1 491 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 ZNF654Q8IZM8 581 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 PPTC7Q8NI37 304 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 IGDCC4Q8TDY8 1250 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 KAT2BQ92831 832 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 VWCEQ96DN2 955 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 RRP36Q96EU6 259 aaKnown RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 SPATA33Q96N06 139 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 KATNAL1Q9BW62 490 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 MLXIPQ9HAP2 919 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 HDAC6Q9UBN7 1215 aa7.73□□□□□ -1.17
PSEN1-216ENST00000556066 SEC63Q9UGP8 760 aaKnown RBP7.73□□□□□ -1.17
PSEN1-216ENST00000556066 PRRC2BQ5JSZ5 2229 aaKnown RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CCDC69A6NI79 296 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 SLC27A2O14975 620 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 PPFIA4O75335 1185 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 RXRAP19793 462 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 UBA1P22314 1058 aaKnown RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 KIF5BP33176 963 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 MCM5P33992 734 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 ZNF200P98182 395 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 SP2Q02086 613 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 GHRHRQ02643 423 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 ADGRE1Q14246 886 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 HSDL1Q3SXM5 330 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CELF3Q5SZQ8 465 aaKnown RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 MYSM1Q5VVJ2 828 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 LRRC8DQ7L1W4 858 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 SKAP1Q86WV1 359 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 RAB11FIP4Q86YS3 637 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CMTR1Q8N1G2 835 aaKnown RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 MICALL1Q8N3F8 863 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 SAMD3Q8N6K7 520 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 SMARCC2Q8TAQ2 1214 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CAGE1Q8TC20 777 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 AFAP1L1Q8TED9 768 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CUL5Q93034 780 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 ESYT1Q9BSJ8 1104 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 LSG1Q9H089 658 aaKnown RBP7.72□□□□□ -1.17
PSEN1-216ENST00000556066 CERS4Q9HA82 394 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 LY9Q9HBG7 655 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 ANO2Q9NQ90 1003 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 RTEL1Q9NZ71 1219 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 PCDHA11Q9Y5I1 949 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 TRANK1O15050 2925 aa7.72□□□□□ -1.17
PSEN1-216ENST00000556066 TCF20Q9UGU0 1960 aaKnown RBP7.71□□□□□ -1.17
PSEN1-216ENST00000556066 KIF28PB7ZC32 967 aa7.71□□□□□ -1.18
PSEN1-216ENST00000556066 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
PSEN1-216ENST00000556066 DDAH1O94760 285 aa7.71□□□□□ -1.18
PSEN1-216ENST00000556066 PLEKHA8P1O95397 391 aa7.71□□□□□ -1.18
PSEN1-216ENST00000556066 F2P00734 622 aa7.71□□□□□ -1.18
PSEN1-216ENST00000556066 CA3P07451 260 aa7.71□□□□□ -1.18
PSEN1-216ENST00000556066 TGFB3P10600 412 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms