RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 VWCEQ96DN2 955 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 RNPEPQ9H4A4 650 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 NOD1Q9Y239 953 aa14.15□□□□□ -0.14
TRAPPC6B-205ENST00000555269 DDX39AO00148 427 aaKnown RBP14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 JAK2O60674 1132 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CDKL5O76039 1030 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TCF7P36402 384 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 NUBP1P53384 320 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PPIGQ13427 754 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 DHX38Q92620 1227 aaKnown RBP14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 WNT8BQ93098 351 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GTF3C6Q969F1 213 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PCYT2Q99447 389 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SETD4Q9NVD3 440 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SCN10AQ9Y5Y9 1956 aa14.14□□□□□ -0.15
TRAPPC6B-205ENST00000555269 IGLV3-22A0A075B6J6 115 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 M0R2N6 131 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 DHX15O43143 795 aaKnown RBP14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 RBM25P49756 843 aaKnown RBP14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PRR16Q569H4 304 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 MCTP2Q6DN12 878 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 NIPA1Q7RTP0 329 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 DEFB128Q7Z7B8 93 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 RETREG2Q8NC44 543 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 IL23AQ9NPF7 189 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SLC9A2Q9UBY0 812 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
TRAPPC6B-205ENST00000555269 C17orf102A2RUQ5 167 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TREHO43280 583 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CCNE2O96020 404 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 FGBP02675 491 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 IQCF3P0C7M6 154 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 MARK3P27448 753 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CIITAP33076 1130 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 FOSBP53539 338 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ACTR2P61160 394 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GPNMBQ14956 572 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GLG1Q92896 1179 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GJA10Q969M2 543 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 RNPC3Q96LT9 517 aaKnown RBP14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SDF4Q9BRK5 362 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PHF20Q9BVI0 1012 aa14.12□□□□□ -0.15
TRAPPC6B-205ENST00000555269 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 IPO5O00410 1097 aaKnown RBP14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 USP11P51784 963 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 BFSP2Q13515 415 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TRIM71Q2Q1W2 868 aaKnown RBP14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 OTOP2Q7RTS6 562 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CCDC83Q8IWF9 413 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 DAGLBQ8NCG7 672 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ATP6V0A1Q93050 837 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 LENG9Q96B70 501 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CXXC1Q9P0U4 656 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 NFASCO94856 1347 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GRXCR1A8MXD5 290 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ATG7O95352 703 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 CKBP12277 381 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 PTK7Q13308 1070 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 INF2Q27J81 1249 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 EARS2Q5JPH6 523 aaKnown RBP14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ZNF618Q5T7W0 954 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 GALNT17Q6IS24 598 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ABHD15Q6UXT9 468 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 Q7L0L9 218 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 RPUSD2Q8IZ73 545 aaKnown RBP14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ZBTB10Q96DT7 871 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ZNF215Q9UL58 517 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
TRAPPC6B-205ENST00000555269 MSH4O15457 936 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 LGR5O75473 907 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SLC34A2O95436 690 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TDP2O95551 362 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SELPP16109 830 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 HOXC8P31273 242 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 STAT5BP51692 787 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 ADAM17P78536 824 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms