RNA–Protein interactions for RNA: ENST00000553678.1

AL049775.3-201, humanhuman

TSL 3 BASIC

Gene AL049775.3, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049775.3-201ENST00000553678 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
AL049775.3-201ENST00000553678 VCANP13611 3396 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 C17orf102A2RUQ5 167 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 NOP56O00567 594 aaKnown RBP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 CXCL10P02778 98 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 CTSHP09668 335 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 SREBF1P36956 1147 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 RCAN1P53805 252 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 FGD1P98174 961 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 STK3Q13188 491 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 BFSP2Q13515 415 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 NPY5RQ15761 445 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 PPP1R18Q6NYC8 613 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 XRRA1Q6P2D8 792 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 AFAP1L1Q8TED9 768 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 GJA10Q969M2 543 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
AL049775.3-201ENST00000553678 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 TRANK1O15050 2925 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 MEIS1O00470 390 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 LARGE1O95461 756 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 FOSL2P15408 326 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 KRT40Q6A162 431 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 NLRX1Q86UT6 975 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 TRAPPC12Q8WVT3 735 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 SPTBN5Q9NRC6 3674 aaKnown RBP12.5□□□□□ -0.41
AL049775.3-201ENST00000553678 COL4A4P53420 1690 aaPredicted RBP12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 CA3P07451 260 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 IFNAR1P17181 557 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 RFC2P35250 354 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 THPOP40225 353 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 ACTR2P61160 394 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 DBF4BQ8NFT6 615 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 LENG9Q96B70 501 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 KAT6AQ92794 2004 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 LOXHD1Q8IVV2 1947 aa12.49□□□□□ -0.41
AL049775.3-201ENST00000553678 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 LGR5O75473 907 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 CHRNA1P02708 482 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 PFKMP08237 780 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 ATP4AP20648 1035 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 PSMA5P28066 241 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 TAP1Q03518 808 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 SCRN1Q12765 414 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 HERC6Q8IVU3 1022 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
AL049775.3-201ENST00000553678 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 IGBP1P78318 339 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 MGAT3Q09327 533 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 PLA2G4DQ86XP0 818 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 PDRG1Q9NUG6 133 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 SLC9A2Q9UBY0 812 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 PCDHA11Q9Y5I1 949 aa12.47□□□□□ -0.41
AL049775.3-201ENST00000553678 NFASCO94856 1347 aa12.46□□□□□ -0.41
AL049775.3-201ENST00000553678 EMSYQ7Z589 1322 aa12.46□□□□□ -0.41
AL049775.3-201ENST00000553678 IGKV6D-21A0A0A0MT36 114 aa12.46□□□□□ -0.41
AL049775.3-201ENST00000553678 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.46□□□□□ -0.41
AL049775.3-201ENST00000553678 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms