RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 MAP3K14Q99558 947 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 SENP7Q9BQF6 1050 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 LRFN3Q9BTN0 628 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 C1QTNF1Q9BXJ1 281 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 PKD2L1Q9P0L9 805 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 KCNA2P16389 499 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 KCNA5P22460 613 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 TCF7P36402 384 aaPredicted RBP20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 CCDC82Q8N4S0 544 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 CUL5Q93034 780 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 YME1L1Q96TA2 773 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 LSG1Q9H089 658 aaKnown RBP20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 C11orf16Q9NQ32 467 aa20.6■□□□□ 0.89
PRPF40B-215ENST00000551418 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 GNAT1P11488 350 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 MARK3P27448 753 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 SMARCA1P28370 1054 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 NFXL1Q6ZNB6 911 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 IFIH1Q9BYX4 1025 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 PSTPIP2Q9H939 334 aa20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 ZNF215Q9UL58 517 aaPredicted RBP20.59■□□□□ 0.89
PRPF40B-215ENST00000551418 FAM86C2PA6NEL3 165 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 SLC27A2O14975 620 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 CAND2O75155 1236 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 GHRP10912 638 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 IL9P15248 144 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 KIF5BP33176 963 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 GPM6BQ13491 265 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 MARCH8Q5T0T0 291 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 XRRA1Q6P2D8 792 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 CASC1Q6TDU7 716 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 NLRX1Q86UT6 975 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 TMEM192Q8IY95 271 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 MRPL38Q96DV4 380 aaKnown RBP20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
PRPF40B-215ENST00000551418 NRCAMQ92823 1304 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 H3BNC9 293 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 MGAT3Q09327 533 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 LPIN1Q14693 890 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 LEXMQ3ZCV2 418 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 PCYT2Q99447 389 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
PRPF40B-215ENST00000551418 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 H3BQ06 376 aaPredicted RBP20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 LINC00271P0C7V0 271 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 MCM5P33992 734 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 TCEAL5Q5H9L2 206 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 FAM178BQ8IXR5 827 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 SEPT1Q8WYJ6 367 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 GPRASP2Q96D09 838 aa20.56■□□□□ 0.88
PRPF40B-215ENST00000551418 GNAQP50148 359 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 PPFIA1Q13136 1202 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 NECTIN1Q15223 517 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 GRIK4Q16099 956 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 CREB3L3Q68CJ9 461 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 BANK1Q8NDB2 785 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 CYP2W1Q8TAV3 490 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 TMEM87BQ96K49 555 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 MTA3Q9BTC8 594 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 PCDHA6Q9UN73 950 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 PCDHA8Q9Y5H6 950 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 LOXHD1Q8IVV2 1947 aa20.55■□□□□ 0.88
PRPF40B-215ENST00000551418 RALGAPA2Q2PPJ7 1873 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 ENPP3O14638 875 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 PLA2G5P39877 138 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 LIFRP42702 1097 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 IGBP1P78318 339 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 TYW1BQ6NUM6 668 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 RPAINQ86UA6 219 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 TMTC2Q8N394 836 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 FANCBQ8NB91 859 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 GIMAP8Q8ND71 665 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 APBB2Q92870 758 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 IL17RAQ96F46 866 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 PGBD1Q96JS3 809 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 SAMD11Q96NU1 681 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 JADE2Q9NQC1 790 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 CDY2AQ9Y6F7 541 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 COL4A6Q14031 1691 aa20.54■□□□□ 0.88
PRPF40B-215ENST00000551418 TTC3P53804 2025 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 MBLAC1A4D2B0 266 aaPredicted RBP20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 PI4K2BG5E9Z4 385 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 MTMR1Q13613 665 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 PTPROQ16827 1216 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 TMEM31Q5JXX7 168 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 TMTC3Q6ZXV5 915 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 RTN4RL1Q86UN2 441 aaPredicted RBP20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 NEK9Q8TD19 979 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 TRAPPC12Q8WVT3 735 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 LINC01599Q8WXQ3 324 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 GLG1Q92896 1179 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms