RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PITPNM1O00562 1244 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 CYP2C9P11712 490 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 HOXC8P31273 242 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 PPIGQ13427 754 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 SHHQ15465 462 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 PRR16Q569H4 304 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 UTP14CQ5TAP6 766 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 GDF6Q6KF10 455 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 PPP1R13LQ8WUF5 828 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 LENG9Q96B70 501 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 BRMS1Q9HCU9 246 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 TBC1D22BQ9NU19 505 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 TELO2Q9Y4R8 837 aa17.51■□□□□ 0.39
PRPF40B-211ENST00000551063 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 IPO5O00410 1097 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 EDIL3O43854 480 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 LGR5O75473 907 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 CYP2C18P33260 490 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 RBL2Q08999 1139 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 BFSP2Q13515 415 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 CCDC155Q8N6L0 562 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 CTAGE1Q96RT6 745 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 ZNF577Q9BSK1 485 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 WNT8AQ9H1J5 351 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
PRPF40B-211ENST00000551063 UMODL1Q5DID0 1318 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 CYP3A7-CYP3A51PA0A087WV96 503 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 DHX15O43143 795 aaKnown RBP17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 DTNBO60941 627 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 SMIM10L2AP0DMW4 78 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 SMIM10L2BP0DMW5 78 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 CYP3A7P24462 503 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 KRT2P35908 639 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 MCM2P49736 904 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 ACTR2P61160 394 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 TRIM29Q14134 588 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 Q4G0T1 1027 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 ERAP1Q9NZ08 941 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 TCEAL9Q9UHQ7 104 aa17.49■□□□□ 0.39
PRPF40B-211ENST00000551063 ATG7O95352 703 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 MMP1P03956 469 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 CSF2RAP15509 400 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 EPHB4P54760 987 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 KRT76Q01546 638 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 PTK7Q13308 1070 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 INF2Q27J81 1249 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 C9orf50Q5SZB4 431 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 PSRC1Q6PGN9 363 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 RETREG2Q8NC44 543 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 AFAP1L1Q8TED9 768 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 GLG1Q92896 1179 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
PRPF40B-211ENST00000551063 TDP2O95551 362 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 CCNE2O96020 404 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 PFKMP08237 780 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 GNAT1P11488 350 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 RFC2P35250 354 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 SLC26A2P50443 739 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 CCL23P55773 120 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 KRT40Q6A162 431 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 ZNF746Q6NUN9 644 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 SMAP1Q8IYB5 467 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 DHX38Q92620 1227 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 PCYT2Q99447 389 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 RIT2Q99578 217 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 IL23AQ9NPF7 189 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 NRCAMQ92823 1304 aa17.47■□□□□ 0.39
PRPF40B-211ENST00000551063 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 MSH4O15457 936 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 SMAD3P84022 425 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 PPFIA1Q13136 1202 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 HIC1Q14526 733 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 ABHD15Q6UXT9 468 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 PIK3AP1Q6ZUJ8 805 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 DIS3L2Q8IYB7 885 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 SLC5A5Q92911 643 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 TNPO1Q92973 898 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 MYH7BA7E2Y1 1941 aa17.46■□□□□ 0.39
PRPF40B-211ENST00000551063 DLL1O00548 723 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 IQCF3P0C7M6 154 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms