RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 YME1L1Q96TA2 773 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 OSBPL7Q9BZF2 842 aa23.76■■□□□ 1.39
CACNB3-218ENST00000550771 LSG1Q9H089 658 aaKnown RBP23.76■■□□□ 1.39
CACNB3-218ENST00000550771 KCNA2P16389 499 aa23.75■■□□□ 1.39
CACNB3-218ENST00000550771 SP4Q02446 784 aa23.75■■□□□ 1.39
CACNB3-218ENST00000550771 MICAL3Q7RTP6 2002 aa23.74■■□□□ 1.39
CACNB3-218ENST00000550771 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.74■■□□□ 1.39
CACNB3-218ENST00000550771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.74■■□□□ 1.39
CACNB3-218ENST00000550771 TAF2Q6P1X5 1199 aa23.74■■□□□ 1.39
CACNB3-218ENST00000550771 UBE2ZQ9H832 354 aaPredicted RBP23.74■■□□□ 1.39
CACNB3-218ENST00000550771 SIP14410 1827 aa23.74■■□□□ 1.39
CACNB3-218ENST00000550771 SLC27A2O14975 620 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 ATP9AO75110 1047 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 ITGB5P18084 799 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 TCF7P36402 384 aaPredicted RBP23.73■■□□□ 1.39
CACNB3-218ENST00000550771 PTPROQ16827 1216 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 EPC2Q52LR7 807 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 CMTR1Q8N1G2 835 aaKnown RBP23.73■■□□□ 1.39
CACNB3-218ENST00000550771 SEPT1Q8WYJ6 367 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 MRPL38Q96DV4 380 aaKnown RBP23.73■■□□□ 1.39
CACNB3-218ENST00000550771 IFIH1Q9BYX4 1025 aaKnown RBP23.73■■□□□ 1.39
CACNB3-218ENST00000550771 SLC12A7Q9Y666 1083 aa23.73■■□□□ 1.39
CACNB3-218ENST00000550771 MAFGO15525 162 aa23.72■■□□□ 1.39
CACNB3-218ENST00000550771 RXRAP19793 462 aa23.72■■□□□ 1.39
CACNB3-218ENST00000550771 ERAP1Q9NZ08 941 aa23.72■■□□□ 1.39
CACNB3-218ENST00000550771 UBIAD1Q9Y5Z9 338 aa23.72■■□□□ 1.39
CACNB3-218ENST00000550771 COL4A6Q14031 1691 aa23.72■■□□□ 1.39
CACNB3-218ENST00000550771 SPDYE3A6NKU9 549 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 UPP2O95045 317 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 CHRNA1P02708 482 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 PPFIA1Q13136 1202 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 MTMR1Q13613 665 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 NECTIN1Q15223 517 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 LEXMQ3ZCV2 418 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 CREB3L3Q68CJ9 461 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 TMTC3Q6ZXV5 915 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 SGMS1Q86VZ5 419 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 FANCBQ8NB91 859 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 ESYT1Q9BSJ8 1104 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 EHMT1Q9H9B1 1298 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 JADE2Q9NQC1 790 aa23.71■■□□□ 1.39
CACNB3-218ENST00000550771 GSTTP1A0A1W2PQM5 241 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 H3BNC9 293 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 IRX6P78412 446 aaPredicted RBP23.7■■□□□ 1.38
CACNB3-218ENST00000550771 COL9A3Q14050 684 aaPredicted RBP23.7■■□□□ 1.38
CACNB3-218ENST00000550771 TIGD5Q53EQ6 642 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 RSPH3Q86UC2 560 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 TMEM192Q8IY95 271 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 SMARCAD1Q9H4L7 1026 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 RAPGEFL1Q9UHV5 662 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 PCDHA6Q9UN73 950 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 PCDHA8Q9Y5H6 950 aa23.7■■□□□ 1.38
CACNB3-218ENST00000550771 BRWD1Q9NSI6 2320 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 MBLAC1A4D2B0 266 aaPredicted RBP23.69■■□□□ 1.38
CACNB3-218ENST00000550771 MGAT3Q09327 533 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 GRIK4Q16099 956 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 UBE2SQ16763 222 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 RUFY4Q6ZNE9 571 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 TEX2Q8IWB9 1127 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 EPHX3Q9H6B9 360 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 TUBE1Q9UJT0 475 aa23.69■■□□□ 1.38
CACNB3-218ENST00000550771 DOCK5Q9H7D0 1870 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 BDP1A6H8Y1 2624 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 RPLP2P05387 115 aaKnown RBP23.68■■□□□ 1.38
CACNB3-218ENST00000550771 GHRP10912 638 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 KCNA5P22460 613 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 GPM6BQ13491 265 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 GLG1Q92896 1179 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
CACNB3-218ENST00000550771 hCG_1642624A0A1W2PR95 340 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 MARK3P27448 753 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 HEATR3Q7Z4Q2 680 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 MICU3Q86XE3 530 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 RAB11FIP4Q86YS3 637 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 CCDC82Q8N4S0 544 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 BANK1Q8NDB2 785 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.67■■□□□ 1.38
CACNB3-218ENST00000550771 LRRC2Q9BYS8 371 aa23.67■■□□□ 1.38
CACNB3-218ENST00000550771 LPIN1Q14693 890 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 PUS10Q3MIT2 529 aaKnown RBP23.66■■□□□ 1.38
CACNB3-218ENST00000550771 MARCH8Q5T0T0 291 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 SYNE3Q6ZMZ3 975 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 FIBCD1Q8N539 461 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 JPH1Q9HDC5 661 aaPredicted RBP23.66■■□□□ 1.38
CACNB3-218ENST00000550771 ANO2Q9NQ90 1003 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 PKD2L1Q9P0L9 805 aa23.66■■□□□ 1.38
CACNB3-218ENST00000550771 RRN3P2A6NIE6 340 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 C5orf67F2Z3F1 127 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 RB1P06400 928 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 FBXO47Q5MNV8 452 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 RNF20Q5VTR2 975 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 NEK9Q8TD19 979 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 DNAJB3Q8WWF6 145 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 TNPO1Q92973 898 aaKnown RBP23.65■■□□□ 1.38
CACNB3-218ENST00000550771 RBM28Q9NW13 759 aaKnown RBP23.65■■□□□ 1.38
CACNB3-218ENST00000550771 RWDD3Q9Y3V2 267 aa23.65■■□□□ 1.38
CACNB3-218ENST00000550771 ENPP3O14638 875 aa23.64■■□□□ 1.37
CACNB3-218ENST00000550771 COL19A1Q14993 1142 aa23.64■■□□□ 1.37
CACNB3-218ENST00000550771 TMEM31Q5JXX7 168 aa23.64■■□□□ 1.37
CACNB3-218ENST00000550771 TSHZ1Q6ZSZ6 1077 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms