RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 TGFBRAP1Q8WUH2 860 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CENPHQ9H3R5 247 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 BZW2Q9Y6E2 419 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 GMNCA6NCL1 334 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CCDC188H7C350 402 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CHUKO15111 745 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 TDP2O95551 362 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 LDHCP07864 332 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 CDR1P51861 262 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 ARID5AQ03989 594 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 IFT88Q13099 833 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 GLIS3Q8NEA6 775 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 SCFD2Q8WU76 684 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 DNAJC19Q96DA6 116 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 PPANQ9NQ55 473 aaKnown RBP16.48■□□□□ 0.23
PDE1B-207ENST00000550620 JAG2Q9Y219 1238 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 KDM3AQ9Y4C1 1321 aa16.48■□□□□ 0.23
PDE1B-207ENST00000550620 PGRMC1O00264 195 aaKnown RBP16.47■□□□□ 0.23
PDE1B-207ENST00000550620 AGBL2Q5U5Z8 902 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 C6orf89Q6UWU4 347 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
PDE1B-207ENST00000550620 NYXQ9GZU5 481 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 NT5C3AQ9H0P0 336 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 CEP104O60308 925 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 TRADDQ15628 312 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 KCNK18Q7Z418 384 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 CCDC13Q8IYE1 715 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 GANQ9H2C0 597 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 RIOX1Q9H6W3 641 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 KLC4Q9NSK0 619 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
PDE1B-207ENST00000550620 H0YGN5 161 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 RGL2O15211 777 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 ANXA13P27216 316 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 ECHS1P30084 290 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 CDK8P49336 464 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 SLC12A6Q9UHW9 1150 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
PDE1B-207ENST00000550620 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 MARCH6O60337 910 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 ZNF844Q08AG5 666 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 ODF2Q5BJF6 829 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 MAPKAPK5Q8IW41 473 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 BHMG1C9JSJ3 638 aaPredicted RBP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 CETN3O15182 167 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 RASSF9O75901 435 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 ENOX2Q16206 610 aaKnown RBP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 EDRF1Q3B7T1 1238 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 ZC3H3Q8IXZ2 948 aaKnown RBP16.45■□□□□ 0.22
PDE1B-207ENST00000550620 CCDC26Q8TAB7 109 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 CCDC114Q96M63 670 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 SPAG5Q96R06 1193 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 SLITRK6Q9H5Y7 841 aa16.45■□□□□ 0.22
PDE1B-207ENST00000550620 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 SART1O43290 800 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 FLOT1O75955 427 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 PAEPP09466 180 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 ADAM9Q13443 819 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 UAP1Q16222 522 aaPredicted RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 HYIQ5T013 277 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 CCDC50Q8IVM0 306 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 NELFCDQ8IXH7 590 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 SYCE1Q8N0S2 351 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 P3H4Q92791 437 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 NOC2LQ9Y3T9 749 aaKnown RBP16.44■□□□□ 0.22
PDE1B-207ENST00000550620 MYH10P35580 1976 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 KRIT1O00522 736 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 SLC26A4O43511 780 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 PTK2Q05397 1052 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 DDB1Q16531 1140 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
PDE1B-207ENST00000550620 TAX1BP1Q86VP1 789 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms