RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CCDC69A6NI79 296 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 ATP9AO75110 1047 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 KCNA2P16389 499 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 ARHGAP4P98171 946 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 CMTR1Q8N1G2 835 aaKnown RBP24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 APBB2Q92870 758 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 PSTPIP2Q9H939 334 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 SIP14410 1827 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 CALM1P0DP23 149 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 CALM2P0DP24 149 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 CALM3P0DP25 149 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 ITGB5P18084 799 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 RXRAP19793 462 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 TCF7P36402 384 aaPredicted RBP24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 IRX6P78412 446 aaPredicted RBP24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 RPAINQ86UA6 219 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 CDHR1Q96JP9 859 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 SAMD11Q96NU1 681 aa24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 UBE2ZQ9H832 354 aaPredicted RBP24.94■■□□□ 1.58
SMARCC2-210ENST00000550519 SLC27A2O14975 620 aa24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 EPC2Q52LR7 807 aa24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 MRPL38Q96DV4 380 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 YME1L1Q96TA2 773 aa24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 IFIH1Q9BYX4 1025 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 UBIAD1Q9Y5Z9 338 aa24.93■■□□□ 1.58
SMARCC2-210ENST00000550519 GSTTP1A0A1W2PQM5 241 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 UPP2O95045 317 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 CHRNA1P02708 482 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 NECTIN1Q15223 517 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 SEPT1Q8WYJ6 367 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 DOCK5Q9H7D0 1870 aa24.92■■□□□ 1.58
SMARCC2-210ENST00000550519 CREB3L3Q68CJ9 461 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 TAF2Q6P1X5 1199 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 ESYT1Q9BSJ8 1104 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 EPHX3Q9H6B9 360 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 EHMT1Q9H9B1 1298 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 SLC12A7Q9Y666 1083 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 COL4A6Q14031 1691 aa24.91■■□□□ 1.58
SMARCC2-210ENST00000550519 hCG_1642624A0A1W2PR95 340 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 H3BNC9 293 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 UBE2SQ16763 222 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 LEXMQ3ZCV2 418 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 RUFY4Q6ZNE9 571 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 TMTC3Q6ZXV5 915 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 FANCBQ8NB91 859 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 ERAP1Q9NZ08 941 aa24.9■■□□□ 1.58
SMARCC2-210ENST00000550519 MBLAC1A4D2B0 266 aaPredicted RBP24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 MAFGO15525 162 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 MGAT3Q09327 533 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 PPFIA1Q13136 1202 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 MTMR1Q13613 665 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 PTPROQ16827 1216 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 SGMS1Q86VZ5 419 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 RAB11FIP4Q86YS3 637 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 TMEM192Q8IY95 271 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 CCDC82Q8N4S0 544 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 LRRC2Q9BYS8 371 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 JADE2Q9NQC1 790 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 PCDHA6Q9UN73 950 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 PCDHA8Q9Y5H6 950 aa24.89■■□□□ 1.58
SMARCC2-210ENST00000550519 SPDYE3A6NKU9 549 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 GHRP10912 638 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 GRIK4Q16099 956 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 MARCH8Q5T0T0 291 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 SMARCAD1Q9H4L7 1026 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 TUBE1Q9UJT0 475 aa24.88■■□□□ 1.57
SMARCC2-210ENST00000550519 KCNA5P22460 613 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 MARK3P27448 753 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 GPM6BQ13491 265 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 LPIN1Q14693 890 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 RSPH3Q86UC2 560 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 GLG1Q92896 1179 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 KHSRPQ92945 711 aaKnown RBP eCLIP24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 CD320Q9NPF0 282 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 PKD2L1Q9P0L9 805 aa24.87■■□□□ 1.57
SMARCC2-210ENST00000550519 TIGD5Q53EQ6 642 aa24.86■■□□□ 1.57
SMARCC2-210ENST00000550519 HEATR3Q7Z4Q2 680 aa24.86■■□□□ 1.57
SMARCC2-210ENST00000550519 IL17RAQ96F46 866 aa24.86■■□□□ 1.57
SMARCC2-210ENST00000550519 ANO2Q9NQ90 1003 aa24.86■■□□□ 1.57
SMARCC2-210ENST00000550519 MICU3Q86XE3 530 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 BANK1Q8NDB2 785 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 NEK9Q8TD19 979 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 DNAJB3Q8WWF6 145 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 PCYT2Q99447 389 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 LRFN3Q9BTN0 628 aa24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 RC3H2Q9HBD1 1191 aaKnown RBP24.85■■□□□ 1.57
SMARCC2-210ENST00000550519 ENPP3O14638 875 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 LINC00271P0C7V0 271 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 FBXO47Q5MNV8 452 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 FAM178BQ8IXR5 827 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 FIBCD1Q8N539 461 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 MXRA8Q9BRK3 442 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 KCNH7Q9NS40 1196 aa24.84■■□□□ 1.57
SMARCC2-210ENST00000550519 C5orf67F2Z3F1 127 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 RPLP2P05387 115 aaKnown RBP24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 COL19A1Q14993 1142 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 TCEAL5Q5H9L2 206 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 WWC2Q6AWC2 1192 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 APOA5Q6Q788 366 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms