RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 B4E1Z4 1266 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 STXBP3O00186 592 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 DHX16O60231 1041 aaKnown RBP15.7■□□□□ 0.1
CDX2-202ENST00000548877 CHRNA1P02708 482 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 PTPN5P54829 565 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 NEDD9Q14511 834 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 CBX2Q14781 532 aaPredicted RBP15.7■□□□□ 0.1
CDX2-202ENST00000548877 NAALADL2Q58DX5 795 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 STAG2Q8N3U4 1231 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
CDX2-202ENST00000548877 GPR20Q99678 358 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 SETD4Q9NVD3 440 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 NRCAMQ92823 1304 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 KMT2EQ8IZD2 1858 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 PALM3A6NDB9 673 aaPredicted RBP15.69■□□□□ 0.1
CDX2-202ENST00000548877 LOC730098B7Z3J9 87 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 KLRF2D3W0D1 207 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
CDX2-202ENST00000548877 ENPP3O14638 875 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 ST18O60284 1047 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 SORBS3O60504 671 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 HOXA13P31271 388 aaPredicted RBP15.69■□□□□ 0.1
CDX2-202ENST00000548877 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
CDX2-202ENST00000548877 MGAT3Q09327 533 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 GNPTABQ3T906 1256 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 TAF2Q6P1X5 1199 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 TRIM67Q6ZTA4 783 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 PHOX2BQ99453 314 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 PLAGL2Q9UPG8 496 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 ZDBF2Q9HCK1 2354 aa15.69■□□□□ 0.1
CDX2-202ENST00000548877 CFAP54Q96N23 3096 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 CACNA1HO95180 2353 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 TMEM221A6NGB7 291 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 GCOM1H8Y6P7 765 aaPredicted RBP15.68■□□□□ 0.1
CDX2-202ENST00000548877 M0R296 226 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 DGKIO75912 1065 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 POLR2MP0CAP2 368 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDX2-202ENST00000548877 COASYQ13057 564 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 SEC23AQ15436 765 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 CLUL1Q15846 466 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 IER5LQ5T953 404 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 SMRP1Q8NCR6 262 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 SENP7Q9BQF6 1050 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 RIOX1Q9H6W3 641 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 ALG13Q9NP73 1137 aaKnown RBP15.68■□□□□ 0.1
CDX2-202ENST00000548877 CLEC1BQ9P126 229 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
CDX2-202ENST00000548877 MAD2L2Q9UI95 211 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 ZNF215Q9UL58 517 aaPredicted RBP15.68■□□□□ 0.1
CDX2-202ENST00000548877 KIAA1671Q9BY89 1806 aa15.68■□□□□ 0.1
CDX2-202ENST00000548877 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
CDX2-202ENST00000548877 LINC01565O15544 149 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 FIBPO43427 364 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 SDSP20132 328 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 TCF15Q12870 199 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 LPIN1Q14693 890 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 SLC35G1Q2M3R5 365 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 EFHBQ8N7U6 833 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 PPP2R3CQ969Q6 453 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 KRT23Q9C075 422 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 CNNM2Q9H8M5 875 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
CDX2-202ENST00000548877 MBLAC1A4D2B0 266 aaPredicted RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 RRP1P56182 461 aaKnown RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 ZXDAP98168 799 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 HDAC1Q13547 482 aaPredicted RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 BTG3Q14201 252 aaPredicted RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 IFIT1BQ5T764 474 aaKnown RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 TRIM50Q86XT4 487 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 CMTR2Q8IYT2 770 aaKnown RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 PBXIP1Q96AQ6 731 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
CDX2-202ENST00000548877 UBAC1Q9BSL1 405 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 DSCC1Q9BVC3 393 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 SQORQ9Y6N5 450 aa15.66■□□□□ 0.1
CDX2-202ENST00000548877 RPLP2P05387 115 aaKnown RBP15.65■□□□□ 0.1
CDX2-202ENST00000548877 GHRP10912 638 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 DNAJB1P25685 340 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 FBXO47Q5MNV8 452 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 XRRA1Q6P2D8 792 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 FCHSD1Q86WN1 690 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 FBXL6Q8N531 539 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 IGFLR1Q9H665 355 aa15.65■□□□□ 0.1
CDX2-202ENST00000548877 ITGB1P05556 798 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 NDUFV1P49821 464 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 IMMTQ16891 758 aaKnown RBP15.64■□□□□ 0.09
CDX2-202ENST00000548877 RUFY4Q6ZNE9 571 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 TSHZ1Q6ZSZ6 1077 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 FAM43BQ6ZT52 329 aaPredicted RBP15.64■□□□□ 0.09
CDX2-202ENST00000548877 RSPH3Q86UC2 560 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 SUGP1Q8IWZ8 645 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms