RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 CUL5Q93034 780 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 IGFLR1Q9H665 355 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 TTC3P53804 2025 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 ATP9AO75110 1047 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 IBSPP21815 317 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 PDE4AP27815 886 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 HOXC8P31273 242 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 IGBP1P78318 339 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 TROAPQ12815 778 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 CSPP1Q1MSJ5 1256 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 ALYREFQ86V81 257 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 CMTR1Q8N1G2 835 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 NEK9Q8TD19 979 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 NSUN3Q9H649 340 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-205ENST00000548277 GRM6O15303 877 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 RXRAP19793 462 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 GTF2F1P35269 517 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 ANTXR2P58335 489 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 TIGD5Q53EQ6 642 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 DNAJB3Q8WWF6 145 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 APBB2Q92870 758 aa13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 RRP36Q96EU6 259 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-205ENST00000548277 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 PRR33A8MZF0 331 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 ENPP3O14638 875 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 CAND2O75155 1236 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 STAM2O75886 525 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 CHMLP26374 656 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 ADAM17P78536 824 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 FAM26DQ5JW98 314 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 PCNX4Q63HM2 1172 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 CCDC82Q8N4S0 544 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 GLG1Q92896 1179 aa13.76□□□□□ -0.21
TRAFD1-205ENST00000548277 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 NRCAMQ92823 1304 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 MEIS2O14770 477 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 ALADP13716 330 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 BMPR1AP36894 532 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 TMEM62Q0P6H9 643 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 PPFIA1Q13136 1202 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 LPIN1Q14693 890 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 UBE2SQ16763 222 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 FAM49AQ9H0Q0 323 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 ALG13Q9NP73 1137 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 PLXNA4Q9HCM2 1894 aa13.75□□□□□ -0.21
TRAFD1-205ENST00000548277 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 LINC01565O15544 149 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 CD52P31358 61 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 LTBRP36941 435 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 HYAL1Q12794 435 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 GRIK4Q16099 956 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 RSPH3Q86UC2 560 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 SRBD1Q8N5C6 995 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 SEPT1Q8WYJ6 367 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 SENP7Q9BQF6 1050 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-205ENST00000548277 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 DCXO43602 365 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 KCNA2P16389 499 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 ITGB5P18084 799 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 ZP2Q05996 745 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 MGAT3Q09327 533 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 FBXO47Q5MNV8 452 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 MB21D2Q8IYB1 491 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 GIMAP8Q8ND71 665 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 C11orf84Q9BUA3 381 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-205ENST00000548277 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms