RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IPO5O00410 1097 aaKnown RBP21.27■■□□□ 1
PRPF40B-206ENST00000547764 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
PRPF40B-206ENST00000547764 FOSBP53539 338 aa21.27■■□□□ 1
PRPF40B-206ENST00000547764 TDHQ8IZJ6 230 aa21.27■■□□□ 1
PRPF40B-206ENST00000547764 ZNF577Q9BSK1 485 aa21.27■■□□□ 1
PRPF40B-206ENST00000547764 ZNF215Q9UL58 517 aaPredicted RBP21.27■■□□□ 1
PRPF40B-206ENST00000547764 CCDC194A0A1B0GVG4 234 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 DDX39AO00148 427 aaKnown RBP21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 CD2BP2O95400 341 aaKnown RBP21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 EPHB4P54760 987 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 ACTR2P61160 394 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 HIC1Q14526 733 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 INF2Q27J81 1249 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 TMEM199Q8N511 208 aa21.26■□□□□ 0.99
PRPF40B-206ENST00000547764 TDP2O95551 362 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 CCNE2O96020 404 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 SMIM10L2AP0DMW4 78 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 SMIM10L2BP0DMW5 78 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 CSF2RAP15509 400 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 KRT2P35908 639 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 CCL23P55773 120 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 ZNF200P98182 395 aaPredicted RBP21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 KRT40Q6A162 431 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 GLG1Q92896 1179 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 PCYT2Q99447 389 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 WNT8AQ9H1J5 351 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 RNPEPQ9H4A4 650 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 TBC1D22BQ9NU19 505 aa21.25■□□□□ 0.99
PRPF40B-206ENST00000547764 CYP3A7-CYP3A51PA0A087WV96 503 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 MSH4O15457 936 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 LGR5O75473 907 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 ATG7O95352 703 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 MMP1P03956 469 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 CYP3A7P24462 503 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 NR5A1Q13285 461 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 TRIM29Q14134 588 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 SHHQ15465 462 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 Q4G0T1 1027 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 EARS2Q5JPH6 523 aaKnown RBP21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 C9orf50Q5SZB4 431 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 PIK3AP1Q6ZUJ8 805 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 SMARCAD1Q9H4L7 1026 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 EMSYQ7Z589 1322 aa21.24■□□□□ 0.99
PRPF40B-206ENST00000547764 C17orf102A2RUQ5 167 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 HOXC8P31273 242 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 HMGN5P82970 282 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 PPIGQ13427 754 aaKnown RBP eCLIP21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 MOXD1Q6UVY6 613 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 DHX38Q92620 1227 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 TNFRSF25Q93038 417 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 TMX3Q96JJ7 454 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 MBOAT7Q96N66 472 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 AZI2Q9H6S1 392 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 ERAP1Q9NZ08 941 aa21.23■□□□□ 0.99
PRPF40B-206ENST00000547764 BTBD18B2RXH4 712 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 PITPNM1O00562 1244 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 MARK3P27448 753 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 MCM2P49736 904 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 FXR1P51114 621 aaKnown RBP eCLIP21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 BFSP2Q13515 415 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 LETM2Q2VYF4 491 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 ABHD15Q6UXT9 468 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 C16orf59Q7L2K0 433 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 NEK8Q86SG6 692 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 DIS3L2Q8IYB7 885 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 SCLYQ96I15 445 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 SETD4Q9NVD3 440 aa21.22■□□□□ 0.99
PRPF40B-206ENST00000547764 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 IGKV6D-21A0A0A0MT36 114 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 FAM205CA6NFA0 338 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 ACRP10323 421 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 STAT5BP51692 787 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 GUCY1B3Q02153 619 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 PTK7Q13308 1070 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 ZNF746Q6NUN9 644 aaPredicted RBP21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 PLPPR4Q7Z2D5 763 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 FAM184AQ8NB25 1140 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 CAGE1Q8TC20 777 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 SLC5A5Q92911 643 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 ATP6V0A1Q93050 837 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 GJA10Q969M2 543 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 C8orf76Q96K31 380 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 IL23AQ9NPF7 189 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 DDX25Q9UHL0 483 aaKnown RBP21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 LAMA3Q16787 3333 aa21.21■□□□□ 0.99
PRPF40B-206ENST00000547764 TREHO43280 583 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 IQCF3P0C7M6 154 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 GNAT1P11488 350 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 KRT76Q01546 638 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 LRIT3Q3SXY7 679 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 MIS18BP1Q6P0N0 1132 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 SERINC5Q86VE9 423 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 CCDC155Q8N6L0 562 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 WNT8BQ93098 351 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 RIT2Q99578 217 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 NRCAMQ92823 1304 aa21.2■□□□□ 0.98
PRPF40B-206ENST00000547764 BACH1O14867 736 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms