RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-204ENST00000547517 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 MARK3P27448 753 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 SEPT1Q8WYJ6 367 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 SCLYQ96I15 445 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
RAB5C-204ENST00000547517 CTAGE1Q96RT6 745 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 ZNF577Q9BSK1 485 aa13.44□□□□□ -0.26
RAB5C-204ENST00000547517 C17orf102A2RUQ5 167 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 IPO5O00410 1097 aaKnown RBP13.43□□□□□ -0.26
RAB5C-204ENST00000547517 DLL1O00548 723 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 ST18O60284 1047 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 ACRP10323 421 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 CIITAP33076 1130 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 ACTR2P61160 394 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 ZNF200P98182 395 aaPredicted RBP13.43□□□□□ -0.26
RAB5C-204ENST00000547517 BFSP2Q13515 415 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 HIC1Q14526 733 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 NONOQ15233 471 aaKnown RBP eCLIP13.43□□□□□ -0.26
RAB5C-204ENST00000547517 KRT25Q7Z3Z0 450 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 CCDC155Q8N6L0 562 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 GLG1Q92896 1179 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
RAB5C-204ENST00000547517 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
RAB5C-204ENST00000547517 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 EDIL3O43854 480 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 TDP2O95551 362 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 CCNE2O96020 404 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 TRIM29Q14134 588 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 INF2Q27J81 1249 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 LRIT3Q3SXY7 679 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 DHX38Q92620 1227 aaKnown RBP13.42□□□□□ -0.26
RAB5C-204ENST00000547517 LENG9Q96B70 501 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
RAB5C-204ENST00000547517 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■■■■□ 22.3
RAB5C-204ENST00000547517 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 IL23AQ9NPF7 189 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 TCEAL9Q9UHQ7 104 aa13.42□□□□□ -0.26
RAB5C-204ENST00000547517 LGR5O75473 907 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 KRT2P35908 639 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 USP11P51784 963 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 PTK7Q13308 1070 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
RAB5C-204ENST00000547517 PIK3AP1Q6ZUJ8 805 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 ATP6V0A1Q93050 837 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 WNT8BQ93098 351 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 PCYT2Q99447 389 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 SMARCAD1Q9H4L7 1026 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 SETD4Q9NVD3 440 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
RAB5C-204ENST00000547517 BACH1O14867 736 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 MSH4O15457 936 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
RAB5C-204ENST00000547517 TREHO43280 583 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 MMP1P03956 469 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 CKBP12277 381 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 HOXC8P31273 242 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 NR5A1Q13285 461 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 LETM2Q2VYF4 491 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 KRT40Q6A162 431 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 LRRC8DQ7L1W4 858 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 DEFB128Q7Z7B8 93 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 NEK8Q86SG6 692 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 AFAP1L1Q8TED9 768 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 GJA10Q969M2 543 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
RAB5C-204ENST00000547517 TBC1D22BQ9NU19 505 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
RAB5C-204ENST00000547517 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
RAB5C-204ENST00000547517 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 CHMP2AO43633 222 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 GAS7O60861 476 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 CD2BP2O95400 341 aaKnown RBP13.39□□□□□ -0.27
RAB5C-204ENST00000547517 GNAT1P11488 350 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 SELPP16109 830 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 STAT5BP51692 787 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 IGBP1P78318 339 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 KRT76Q01546 638 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 RBL2Q08999 1139 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 GRIK4Q16099 956 aa13.39□□□□□ -0.27
RAB5C-204ENST00000547517 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms