RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
GABRB3-205ENST00000545868 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
GABRB3-205ENST00000545868 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
GABRB3-205ENST00000545868 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.61
GABRB3-205ENST00000545868 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
GABRB3-205ENST00000545868 B4DLN1 442 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 CFBP00751 764 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 NR3C2P08235 984 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 CFHP08603 1231 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
GABRB3-205ENST00000545868 SELPP16109 830 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
GABRB3-205ENST00000545868 SP2Q02086 613 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 STXBP2Q15833 593 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 ARHGEF16Q5VV41 709 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 GDPD5Q8WTR4 605 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 HLA-CQ95604 372 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 PDCD2LQ9BRP1 358 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 MAF1Q9H063 256 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 MRPL11Q9Y3B7 192 aaKnown RBP11.2□□□□□ -0.62
GABRB3-205ENST00000545868 TAF6LQ9Y6J9 622 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
GABRB3-205ENST00000545868 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-205ENST00000545868 PLXNA4Q9HCM2 1894 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 TLL1O43897 1013 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 EIF3JO75822 258 aaKnown RBP11.19□□□□□ -0.62
GABRB3-205ENST00000545868 GSPT1P15170 499 aaKnown RBP11.19□□□□□ -0.62
GABRB3-205ENST00000545868 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
GABRB3-205ENST00000545868 DGKDQ16760 1214 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 ZNF618Q5T7W0 954 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 BANK1Q8NDB2 785 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 EXOC6Q8TAG9 804 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 ALG1Q9BT22 464 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 BCAS3Q9H6U6 928 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
GABRB3-205ENST00000545868 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 CYTH3O43739 400 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 DHX16O60231 1041 aaKnown RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 RNF40O75150 1001 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 UBA1P22314 1058 aaKnown RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 NT5C2P49902 561 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 GUCA2AQ02747 115 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 PTK7Q13308 1070 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 PGM5Q15124 567 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 IMMTQ16891 758 aaKnown RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 KIAA0753Q2KHM9 967 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 IFIT1BQ5T764 474 aaKnown RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 AMNQ9BXJ7 453 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 KRT23Q9C075 422 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-205ENST00000545868 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 TELO2Q9Y4R8 837 aa11.18□□□□□ -0.62
GABRB3-205ENST00000545868 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 ZBTB5O15062 677 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 GJB5O95377 273 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 GGPS1O95749 300 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 MYCLP12524 364 aaPredicted RBP11.17□□□□□ -0.62
GABRB3-205ENST00000545868 HOXC8P31273 242 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 KCNJ6P48051 423 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 PTH1RQ03431 593 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 FUT2Q10981 343 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 GRM4Q14833 912 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
GABRB3-205ENST00000545868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
GABRB3-205ENST00000545868 VSIG10LQ86VR7 867 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
GABRB3-205ENST00000545868 PIGSQ96S52 555 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 UBAC1Q9BSL1 405 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 PCDHA1Q9Y5I3 950 aa11.17□□□□□ -0.62
GABRB3-205ENST00000545868 ZNF318Q5VUA4 2279 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 LINC01553A4QN01 128 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 HIP1O00291 1037 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 CYP21A2P08686 494 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 ERVK-21P61565 698 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
GABRB3-205ENST00000545868 AAMPQ13685 434 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 HOMER1Q86YM7 354 aa11.16□□□□□ -0.62
GABRB3-205ENST00000545868 C7orf31Q8N865 590 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms