RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SPC25Q9HBM1 224 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
LTBR-214ENST00000545445 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
LTBR-214ENST00000545445 TCF20Q9UGU0 1960 aaKnown RBP13.44□□□□□ -0.26
LTBR-214ENST00000545445 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 RFXAPO00287 272 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 MAFGO15525 162 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 MYCLP12524 364 aaPredicted RBP13.44□□□□□ -0.26
LTBR-214ENST00000545445 CIITAP33076 1130 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 DDIT3P35638 169 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 ZNF76P36508 570 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 CCL23P55773 120 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 GJA9P57773 515 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 ORC2Q13416 577 aaPredicted RBP13.44□□□□□ -0.26
LTBR-214ENST00000545445 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 GNPTABQ3T906 1256 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 TMEM31Q5JXX7 168 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 NIPA1Q7RTP0 329 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
LTBR-214ENST00000545445 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 ZBBXA8MT70 800 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 CTAGE5O15320 804 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 BRD1O95696 1058 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 TGFB3P10600 412 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 CYP3A7P24462 503 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 BEX3Q00994 111 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 SETQ01105 290 aaPredicted RBP13.43□□□□□ -0.26
LTBR-214ENST00000545445 INF2Q27J81 1249 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 KCNV1Q6PIU1 500 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
LTBR-214ENST00000545445 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 ARIH1Q9Y4X5 557 aaPredicted RBP13.43□□□□□ -0.26
LTBR-214ENST00000545445 PCDHA11Q9Y5I1 949 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 UBIAD1Q9Y5Z9 338 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 SLC4A7Q9Y6M7 1214 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 TRANK1O15050 2925 aa13.43□□□□□ -0.26
LTBR-214ENST00000545445 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 GBF1Q92538 1859 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
LTBR-214ENST00000545445 RESTQ13127 1097 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 LETM2Q2VYF4 491 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 EARS2Q5JPH6 523 aaKnown RBP13.42□□□□□ -0.26
LTBR-214ENST00000545445 CXCL17Q6UXB2 119 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 IL31RAQ8NI17 732 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
LTBR-214ENST00000545445 MXRA8Q9BRK3 442 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
LTBR-214ENST00000545445 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 CERS4Q9HA82 394 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 C11orf16Q9NQ32 467 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 JADE2Q9NQC1 790 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 MTCH2Q9Y6C9 303 aa13.42□□□□□ -0.26
LTBR-214ENST00000545445 LCTP09848 1927 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
LTBR-214ENST00000545445 EPOPA6NHQ4 379 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 MEIS1O00470 390 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 FIBPO43427 364 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
LTBR-214ENST00000545445 F13A1P00488 732 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 ATP2A2P16615 1042 aaKnown RBP13.41□□□□□ -0.26
LTBR-214ENST00000545445 PTGS1P23219 599 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 ICAM3P32942 547 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 Q4G0T1 1027 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 SCLYQ96I15 445 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
LTBR-214ENST00000545445 PIEZO1Q92508 2521 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
LTBR-214ENST00000545445 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
LTBR-214ENST00000545445 BMP15O95972 392 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 CA3P07451 260 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 ITGB5P18084 799 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 MTMR1Q13613 665 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 TTC38Q5R3I4 469 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 PLA2G4DQ86XP0 818 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 SLC43A3Q8NBI5 491 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 GIMAP8Q8ND71 665 aaPredicted RBP13.4□□□□□ -0.26
LTBR-214ENST00000545445 VWCEQ96DN2 955 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
LTBR-214ENST00000545445 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
LTBR-214ENST00000545445 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 IGLV3-22A0A075B6J6 115 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms