RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-206ENST00000544964 C16orf70Q9BSU1 422 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-206ENST00000544964 PNMA6FA0A0J9YX94 578 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 POLR2MP0CAP2 368 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 IFNAR1P17181 557 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 CCND2P30279 289 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 HOXC8P31273 242 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 MRPS5P82675 430 aaKnown RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 ADAMTS19Q8TE59 1207 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 TMX3Q96JJ7 454 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 SPATA33Q96N06 139 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 SLC26A6Q9BXS9 759 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
ACTN1-206ENST00000544964 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
ACTN1-206ENST00000544964 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
ACTN1-206ENST00000544964 LPXNO60711 386 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 PPFIA4O75335 1185 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 PARNO95453 639 aaKnown RBP14.28□□□□□ -0.12
ACTN1-206ENST00000544964 KCNJ6P48051 423 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 MCM2P49736 904 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 TFF2Q03403 129 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
ACTN1-206ENST00000544964 ZNF618Q5T7W0 954 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 CPLX2Q6PUV4 134 aaKnown RBP14.28□□□□□ -0.12
ACTN1-206ENST00000544964 SERINC5Q86VE9 423 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
ACTN1-206ENST00000544964 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-206ENST00000544964 TLL1O43897 1013 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 JAK2O60674 1132 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 LGALS2P05162 132 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 TGFB3P10600 412 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
ACTN1-206ENST00000544964 GRB10Q13322 594 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 TELO2Q9Y4R8 837 aa14.27□□□□□ -0.13
ACTN1-206ENST00000544964 KAT6AQ92794 2004 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 ATG2AQ2TAZ0 1938 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 KIF28PB7ZC32 967 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 CDKL5O76039 1030 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 GJB5O95377 273 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 ICAM3P32942 547 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 KCNQ1P51787 676 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 TRAF1Q13077 416 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 PKN1Q16512 942 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 WWC2Q6AWC2 1192 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 TRIM22Q8IYM9 498 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 NSUN7Q8NE18 718 aaKnown RBP14.26□□□□□ -0.13
ACTN1-206ENST00000544964 SNX21Q969T3 373 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 NECAB3Q96P71 396 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-206ENST00000544964 UHRF1Q96T88 793 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-206ENST00000544964 RNF26Q9BY78 433 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-206ENST00000544964 NLRC5Q86WI3 1866 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
ACTN1-206ENST00000544964 ABHD14A-ACY1A0A1B0GW23 586 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 SPATA31C2B4DYI2 1134 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-206ENST00000544964 SMIM10L2AP0DMW4 78 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 SMIM10L2BP0DMW5 78 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 BMP1P13497 986 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 SCG2P13521 617 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 PFKFB3Q16875 520 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-206ENST00000544964 GNPTABQ3T906 1256 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 METTL7BQ6UX53 244 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 GDPD5Q8WTR4 605 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 AIFM3Q96NN9 605 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 GPR20Q99678 358 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 MLXIPQ9HAP2 919 aa14.25□□□□□ -0.13
ACTN1-206ENST00000544964 H3BRB1 525 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-206ENST00000544964 STXBP3O00186 592 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 PIK3CDO00329 1044 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 MEIS2O14770 477 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 TREHO43280 583 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 FIBPO43427 364 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 LGR5O75473 907 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 STAM2O75886 525 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 DEXIO95424 95 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 FDPSP14324 419 aaKnown RBP14.24□□□□□ -0.13
ACTN1-206ENST00000544964 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 USP17L6PQ6QN14 398 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-206ENST00000544964 TUT1Q9H6E5 874 aaKnown RBP14.24□□□□□ -0.13
ACTN1-206ENST00000544964 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-206ENST00000544964 MYO7AQ13402 2215 aa14.24□□□□□ -0.13
ACTN1-206ENST00000544964 EMSYQ7Z589 1322 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms