RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CA3P07451 260 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 MYL3P08590 195 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 PDHBP11177 359 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 ACTN1P12814 892 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 POU3F3P20264 500 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 PTMSP20962 102 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 PTPN11Q06124 597 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 FUT2Q10981 343 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 ST3GAL1Q11201 340 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 NFRKBQ6P4R8 1299 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 RNF207Q6ZRF8 634 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 DEFB128Q7Z7B8 93 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 LRRC2Q9BYS8 371 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 ZSCAN16Q9H4T2 348 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 STX6O43752 255 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 KPNA6O60684 536 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 CTDNEP1O95476 244 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 IQCF3P0C7M6 154 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 BMP1P13497 986 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 CALML3P27482 149 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 GJB2P29033 226 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 RPS6P62753 249 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 AKAP17AQ02040 695 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 SSRP1Q08945 709 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 ZNF543Q08ER8 600 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 AAK1Q2M2I8 961 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 NBPF20Q3BBV1 942 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 BRDTQ58F21 947 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 MCTP2Q6DN12 878 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 FAM184AQ8NB25 1140 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 DNERQ8NFT8 737 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 FBXO18Q8NFZ0 1043 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 PHOSPHO2Q8TCD6 241 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 MTMR8Q96EF0 704 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 GLT8D2Q9H1C3 349 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 RIOX1Q9H6W3 641 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-209ENST00000544610 MTCH2Q9Y6C9 303 aa7.53□□□□□ -1.2
CDCA3-209ENST00000544610 SCN10AQ9Y5Y9 1956 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 ESYT2A0FGR8 921 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 EPOPA6NHQ4 379 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 B4DLN1 442 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 ARIH2O95376 493 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 TXNP10599 105 aaKnown RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 SYT1P21579 422 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 CDC27P30260 824 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 ADD1P35611 737 aaKnown RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 MRPL12P52815 198 aaKnown RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 TFF2Q03403 129 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 TAP1Q03518 808 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 BFSP2Q13515 415 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 PPP1R18Q6NYC8 613 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 BRAPQ7Z569 592 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 SESTD1Q86VW0 696 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 HERC6Q8IVU3 1022 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 NECAB1Q8N987 351 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 CCDC12Q8WUD4 166 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 COPS5Q92905 334 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 NECAB3Q96P71 396 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 SENP2Q9HC62 589 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 MAD2L2Q9UI95 211 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 MORC2Q9Y6X9 1032 aaPredicted RBP7.52□□□□□ -1.21
CDCA3-209ENST00000544610 TTC28Q96AY4 2481 aa7.52□□□□□ -1.21
CDCA3-209ENST00000544610 COL4A4P53420 1690 aaPredicted RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 KLRF2D3W0D1 207 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 RFXAPO00287 272 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 FDPSP14324 419 aaKnown RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 KCNQ1P51787 676 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CCT2P78371 535 aaKnown RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 RBL2Q08999 1139 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 TRIM29Q14134 588 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 PFKFB3Q16875 520 aaPredicted RBP7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CCDC62Q6P9F0 684 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CCDC148Q8NFR7 591 aa7.51□□□□□ -1.21
CDCA3-209ENST00000544610 CAGE1Q8TC20 777 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms