RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PTRH1Q86Y79 214 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 TMEFF1Q8IYR6 380 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CISD2Q8N5K1 135 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 LINC00482Q8N8I6 264 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CHST14Q8NCH0 376 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 SMARCC2Q8TAQ2 1214 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 TARS2Q9BW92 718 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 BOCQ9BWV1 1114 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 MTFR1LQ9H019 292 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 B4GALT6Q9UBX8 382 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CNOT6Q9ULM6 557 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 PLA2G2DQ9UNK4 145 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 TELO2Q9Y4R8 837 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 KCTD3Q9Y597 815 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 B3GALT1Q9Y5Z6 326 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 SHROOM4Q9ULL8 1493 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 FAM90A27PA6NNH2 459 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 GSG1L2A8MUP6 293 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 TRAF5O00463 557 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 PDE8AO60658 829 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 F2P00734 622 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 ZBTB48P10074 688 aaPredicted RBP3.37□□□□□ -1.87
YBX3-214ENST00000544501 MYCLP1P12525 358 aaPredicted RBP3.37□□□□□ -1.87
YBX3-214ENST00000544501 MC3RP41968 323 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 STAT5AP42229 794 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 MASP1P48740 699 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 LINC00310P59036 64 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 HTRA3P83110 453 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 KCNA10Q16322 511 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 BTBD8Q5XKL5 378 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 CNKSR3Q6P9H4 555 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 FAM129CQ86XR2 697 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 NOSTRINQ8IVI9 506 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 TMEM151BQ8IW70 566 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 RBM12BQ8IXT5 1001 aaKnown RBP3.37□□□□□ -1.87
YBX3-214ENST00000544501 TTLL6Q8N841 843 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 DLG3Q92796 817 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 TMEM209Q96SK2 561 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 CD244Q9BZW8 370 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 KCNH7Q9NS40 1196 aa3.37□□□□□ -1.87
YBX3-214ENST00000544501 PTPDC1A2A3K4 754 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 DBX1A6NMT0 343 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 ACOT7O00154 380 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 HIP1RO75146 1068 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 CYP7B1O75881 506 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 LTFP02788 710 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 C4BPAP04003 597 aaKnown RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 ENO2P09104 434 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 VIL1P09327 827 aaKnown RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 SDHAP31040 664 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 SOX5P35711 763 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 STAT3P40763 770 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 SCNN1BP51168 640 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 ITGA1P56199 1179 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 IRF9Q00978 393 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 GRIN1Q05586 938 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 DBPQ10586 325 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 SSPNQ14714 243 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 DHCR24Q15392 516 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 CC2D1AQ6P1N0 951 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 KRT26Q7Z3Y9 468 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 RNF180Q86T96 592 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 THNSL2Q86YJ6 484 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 FAM26EQ8N5C1 309 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 KYQ8NBH2 561 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 DACT3Q96B18 629 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 SCYL1Q96KG9 808 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 TOX2Q96NM4 488 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 WRNIP1Q96S55 665 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 C11orf84Q9BUA3 381 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 CAAP1Q9H8G2 361 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 EPB41L4AQ9HCS5 686 aaPredicted RBP3.36□□□□□ -1.87
YBX3-214ENST00000544501 DLL4Q9NR61 685 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 RIC8BQ9NVN3 520 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 IFT57Q9NWB7 429 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 ZKSCAN5Q9Y2L8 839 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 PMF1-BGLAPU3KQ54 211 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 SBNO2Q9Y2G9 1366 aa3.36□□□□□ -1.87
YBX3-214ENST00000544501 SH3D21A4FU49 640 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 NPIPB6E9PJ23 425 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 H7C1D1 291 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 SCDO00767 359 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 KPNA6O60684 536 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 GAS7O60861 476 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CHGBP05060 677 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 CYP17A1P05093 508 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 YBX3P16989 372 aaKnown RBP eCLIP3.35□□□□□ -1.873e-7■■□□□ 12.1
YBX3-214ENST00000544501 PI3P19957 117 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 LIMS1P48059 325 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 FNTBP49356 437 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 OCRLQ01968 901 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 DSG1Q02413 1049 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 SART3Q15020 963 aaKnown RBP3.35□□□□□ -1.87
YBX3-214ENST00000544501 PCBP1Q15365 356 aaKnown RBP eCLIP3.35□□□□□ -1.87
YBX3-214ENST00000544501 SEC23AQ15436 765 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 ZNF174Q15697 407 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 ZNF124Q15973 351 aa3.35□□□□□ -1.87
YBX3-214ENST00000544501 RNF187Q5TA31 235 aaPredicted RBP3.35□□□□□ -1.87
YBX3-214ENST00000544501 CD276Q5ZPR3 534 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms