RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CYP3A4P08684 503 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 SMIM10L2AP0DMW4 78 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 SMIM10L2BP0DMW5 78 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 KRT2P35908 639 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 EPHB4P54760 987 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 ACTR2P61160 394 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 ITGB3BPQ13352 177 aaPredicted RBP12.54□□□□□ -0.4
DDB1-222ENST00000543627 PPIGQ13427 754 aaKnown RBP eCLIP12.54□□□□□ -0.42e-12■■■■□ 22.1
DDB1-222ENST00000543627 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 GJA10Q969M2 543 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
DDB1-222ENST00000543627 FTOQ9C0B1 505 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDB1-222ENST00000543627 RNPEPQ9H4A4 650 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 SETD4Q9NVD3 440 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 GTF2IRD1Q9UHL9 959 aa12.54□□□□□ -0.4
DDB1-222ENST00000543627 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 HAS3O00219 553 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 TDP2O95551 362 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 USP11P51784 963 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
DDB1-222ENST00000543627 ST3GAL1Q11201 340 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 NR5A1Q13285 461 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 BFSP2Q13515 415 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
DDB1-222ENST00000543627 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 CCDC155Q8N6L0 562 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
DDB1-222ENST00000543627 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 PRO3102Q9H379 93 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 SH2B1Q9NRF2 756 aaPredicted RBP12.53□□□□□ -0.4
DDB1-222ENST00000543627 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
DDB1-222ENST00000543627 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 TREHO43280 583 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 CCNT1O60563 726 aaKnown RBP12.52□□□□□ -0.41
DDB1-222ENST00000543627 GAS7O60861 476 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 FGBP02675 491 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 GNAT1P11488 350 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 THPOP40225 353 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 STAT5BP51692 787 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 HIC1Q14526 733 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDB1-222ENST00000543627 KRT40Q6A162 431 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 ZNF365Q70YC5 407 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
DDB1-222ENST00000543627 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.416e-7■■■■□ 21.2
DDB1-222ENST00000543627 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 ERAP1Q9NZ08 941 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 DDX25Q9UHL0 483 aaKnown RBP12.52□□□□□ -0.41
DDB1-222ENST00000543627 NFASCO94856 1347 aa12.52□□□□□ -0.41
DDB1-222ENST00000543627 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 M0R2N6 131 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
DDB1-222ENST00000543627 MSH4O15457 936 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 CCNE2O96020 404 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 HOXD8P13378 290 aaPredicted RBP12.51□□□□□ -0.41
DDB1-222ENST00000543627 CIITAP33076 1130 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 FXR1P51114 621 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■□□ 16.8
DDB1-222ENST00000543627 PPFIA1Q13136 1202 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 NPY5RQ15761 445 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 EARS2Q5JPH6 523 aaKnown RBP12.51□□□□□ -0.41
DDB1-222ENST00000543627 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 FAM160B1Q5W0V3 765 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 NEK8Q86SG6 692 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
DDB1-222ENST00000543627 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
DDB1-222ENST00000543627 SCN10AQ9Y5Y9 1956 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 EDIL3O43854 480 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
DDB1-222ENST00000543627 MMP1P03956 469 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 CTSHP09668 335 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 CKBP12277 381 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
DDB1-222ENST00000543627 PTK7Q13308 1070 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 GRIK4Q16099 956 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 PDXDC2PQ6P474 469 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 C16orf59Q7L2K0 433 aa12.5□□□□□ -0.41
DDB1-222ENST00000543627 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
DDB1-222ENST00000543627 WNT8BQ93098 351 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms