RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 SLC35G1Q2M3R5 365 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 USH1GQ495M9 461 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-217ENST00000543537 TMEM63BQ5T3F8 832 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 RESP18Q5W5W9 173 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 FMR1NBQ8N0W7 255 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-217ENST00000543537 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
COPS7A-217ENST00000543537 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
COPS7A-217ENST00000543537 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 COL20A1Q9P218 1284 aa12.96□□□□□ -0.33
COPS7A-217ENST00000543537 KPNA6O60684 536 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 PPP1R11O60927 126 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-217ENST00000543537 MYL1P05976 194 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 CPT1AP50416 773 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
COPS7A-217ENST00000543537 ATP2C1P98194 919 aaPredicted RBP12.95□□□□□ -0.34
COPS7A-217ENST00000543537 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
COPS7A-217ENST00000543537 FPGSQ05932 587 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 CCDC173Q0VFZ6 552 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 C9orf50Q5SZB4 431 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 KCTD17Q8N5Z5 321 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
COPS7A-217ENST00000543537 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 COL6A3P12111 3177 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 M0R2N6 131 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
COPS7A-217ENST00000543537 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 NR1I2O75469 434 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 ZNF202O95125 648 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 LIG1P18858 919 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 PTGS1P23219 599 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 TOB1P50616 345 aaPredicted RBP12.94□□□□□ -0.34
COPS7A-217ENST00000543537 USP11P51784 963 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 EPHB4P54760 987 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 NR5A1Q13285 461 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
COPS7A-217ENST00000543537 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 MOXD1Q6UVY6 613 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 NEK8Q86SG6 692 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 TAAR1Q96RJ0 339 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 PIGSQ96S52 555 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 RMDN3Q96TC7 470 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 CUEDC2Q9H467 287 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 PCDHA6Q9UN73 950 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 HPSEQ9Y251 543 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 PCDHA8Q9Y5H6 950 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 MYH6P13533 1939 aa12.94□□□□□ -0.34
COPS7A-217ENST00000543537 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
COPS7A-217ENST00000543537 SMC2O95347 1197 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 TPM4P67936 248 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
COPS7A-217ENST00000543537 NPY5RQ15761 445 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 STXBP2Q15833 593 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 STX1AQ16623 288 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 HS1BP3Q53T59 392 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
COPS7A-217ENST00000543537 RASIP1Q5U651 963 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 DTHD1Q6ZMT9 781 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 IQUBQ8NA54 791 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 FAM200AQ8TCP9 573 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
COPS7A-217ENST00000543537 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 PXMP2Q9NR77 195 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
COPS7A-217ENST00000543537 CDH23Q9H251 3354 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 TMEM265A0A087WTH1 108 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 ARIH2O95376 493 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 NR3C2P08235 984 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 TXNP10599 105 aaKnown RBP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 PFKFB1P16118 471 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 PTPN11Q06124 597 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 PDIA5Q14554 519 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 NFRKBQ6P4R8 1299 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
COPS7A-217ENST00000543537 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
COPS7A-217ENST00000543537 CCDC39Q9UFE4 941 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms