RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SECISBP2LQ93073 1101 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 HLA-CQ95604 372 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 HPS3Q969F9 1004 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC42Q96M95 316 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 GPR101Q96P66 508 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC27Q9C0I9 530 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 NDST4Q9H3R1 872 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SH2D4AQ9H788 454 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC39A2Q9NP94 309 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 RIC8AQ9NPQ8 531 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 TMEM260Q9NX78 707 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 MTMR4Q9NYA4 1195 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 BIN2Q9UBW5 565 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CCNL1Q9UK58 526 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 HPCAL4Q9UM19 191 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SNX12Q9UMY4 172 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 JRKLQ9Y4A0 524 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 PCDHA13Q9Y5I0 950 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC37AA6NMS7 1700 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 QSER1Q2KHR3 1735 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 MYO3BQ8WXR4 1341 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 GREB1LQ9C091 1923 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SSU72P8A0A1W2PR75 194 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TMEM88BA6NKF7 163 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 RBAK-RBAKDNI3L0D1 243 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PES1O00541 588 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ZNF185O15231 689 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC26A4O43511 780 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TDP2O95551 362 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PLEKP08567 350 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 HOXA10P31260 410 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TXKP42681 527 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ADCY7P51828 1080 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 KIF11P52732 1056 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SPA17Q15506 151 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TMEM266Q2M3C6 531 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PRR5LQ6MZQ0 368 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PDXDC1Q6P996 788 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 KRT26Q7Z3Y9 468 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 KCNK18Q7Z418 384 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SLF2Q8IX21 1173 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 CNBD1Q8NA66 436 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 AENQ8WTP8 325 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TBC1D22AQ8WUA7 517 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRN4Q8WUT4 740 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SYN2Q92777 582 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 DNAJC19Q96DA6 116 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 MTMR8Q96EF0 704 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 EEF2KMTQ96G04 330 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 NUDT12Q9BQG2 462 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 IFIH1Q9BYX4 1025 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 RAB34Q9BZG1 259 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 UBA5Q9GZZ9 404 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 STK32BQ9NY57 414 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 IVNS1ABPQ9Y6Y0 642 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ATAD5Q96QE3 1844 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 AGPSO00116 658 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SMAPO00193 183 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 USO1O60763 962 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PPP1R11O60927 126 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TACC1O75410 805 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 BBOX1O75936 387 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 UFL1O94874 794 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 MYBL2P10244 700 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 IDEP14735 1019 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 CAPN2P17655 700 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TNFRSF8P28908 595 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 RFC4P35249 363 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 EIF4A3P38919 411 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 LMAN1P49257 510 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 MARSP56192 900 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 KCNMA1Q12791 1236 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC15A2Q16348 729 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 ECM1Q16610 540 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 HSP90B2PQ58FF3 399 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 MFSD14BQ5SR56 506 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 TRAPPC3LQ5T215 181 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 KRT79Q5XKE5 535 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 HGSNATQ68CP4 663 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 C2CD5Q86YS7 1000 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC155Q8N6L0 562 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 EPS8L1Q8TE68 723 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 HAS1Q92839 578 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 COA7Q96BR5 231 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 JMJD4Q9H9V9 463 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 VAT1LQ9HCJ6 419 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 GGA1Q9UJY5 639 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 LHX6Q9UPM6 363 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 SUGT1Q9Y2Z0 365 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 DAGLAQ9Y4D2 1042 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 PCDHA2Q9Y5H9 948 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 CAPN6Q9Y6Q1 641 aa5.75□□□□□ -1.49
ATPAF1-212ENST00000542495 MACROD2A1Z1Q3 448 aa5.74□□□□□ -1.49
ATPAF1-212ENST00000542495 KLRG2A4D1S0 409 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms