RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 KCNA10Q16322 511 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 PRR16Q569H4 304 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 C16orf59Q7L2K0 433 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 PLA2G4DQ86XP0 818 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 SCFD2Q8WU76 684 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 VTI1AQ96AJ9 217 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 GPRASP2Q96D09 838 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 TSEN34Q9BSV6 310 aaKnown RBP18.94■□□□□ 0.62
UBC-208ENST00000540700 AGO4Q9HCK5 861 aaKnown RBP18.94■□□□□ 0.62
UBC-208ENST00000540700 KCNH7Q9NS40 1196 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 PKD2L1Q9P0L9 805 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 MRVI1Q9Y6F6 885 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 MYADML2A6NDP7 307 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 CTAGE5O15320 804 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 FIBPO43427 364 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 CCNT1O60563 726 aaKnown RBP18.93■□□□□ 0.62
UBC-208ENST00000540700 ZSCAN22P10073 491 aaPredicted RBP18.93■□□□□ 0.62
UBC-208ENST00000540700 ACRP10323 421 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 TNFAIP2Q03169 654 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 PPIGQ13427 754 aaKnown RBP eCLIP18.93■□□□□ 0.62
UBC-208ENST00000540700 MTMR1Q13613 665 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 Q4G0T1 1027 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 DUSP28Q4G0W2 176 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 TMEM240Q5SV17 173 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 MYSM1Q5VVJ2 828 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 IQSEC1Q6DN90 963 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 PPP4R3AQ6IN85 833 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 MFSD5Q6N075 450 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 MOXD1Q6UVY6 613 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 NIPA1Q7RTP0 329 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 UHRF1Q96T88 793 aaPredicted RBP18.93■□□□□ 0.62
UBC-208ENST00000540700 FTOQ9C0B1 505 aaKnown RBP eCLIP18.93■□□□□ 0.62
UBC-208ENST00000540700 TMEM60Q9H2L4 133 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 TBX21Q9UL17 535 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 FAM184BQ9ULE4 1060 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 PCDHB6Q9Y5E3 794 aa18.93■□□□□ 0.62
UBC-208ENST00000540700 MSH4O15457 936 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 F13A1P00488 732 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 TXNP10599 105 aaKnown RBP18.92■□□□□ 0.62
UBC-208ENST00000540700 CSF2RAP15509 400 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 MRPS5P82675 430 aaKnown RBP18.92■□□□□ 0.62
UBC-208ENST00000540700 ARHGAP1Q07960 439 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 ADGRE1Q14246 886 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 TTLL4Q14679 1199 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 ZNF174Q15697 407 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 GNPTABQ3T906 1256 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 NLRX1Q86UT6 975 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 ETNPPLQ8TBG4 499 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 PPP1R12CQ9BZL4 782 aa18.92■□□□□ 0.62
UBC-208ENST00000540700 DDX25Q9UHL0 483 aaKnown RBP18.92■□□□□ 0.62
UBC-208ENST00000540700 MOXD2PA6NHM9 499 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 DHX15O43143 795 aaKnown RBP18.91■□□□□ 0.62
UBC-208ENST00000540700 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 ZNF365Q70YC5 407 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 BRAPQ7Z569 592 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 C4orf32Q8N8J7 132 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 KLHDC9Q8NEP7 349 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 HAS1Q92839 578 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 GLT1D1Q96MS3 346 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 IPO9Q96P70 1041 aaKnown RBP18.91■□□□□ 0.62
UBC-208ENST00000540700 KCNMB3Q9NPA1 279 aa18.91■□□□□ 0.62
UBC-208ENST00000540700 DUSP11O75319 330 aaKnown RBP18.9■□□□□ 0.62
UBC-208ENST00000540700 GGPS1O95749 300 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
UBC-208ENST00000540700 MCM7P33993 719 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 TRAPPC10P48553 1259 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 SETQ01105 290 aaPredicted RBP18.9■□□□□ 0.62
UBC-208ENST00000540700 TLK2Q86UE8 772 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.9■□□□□ 0.62
UBC-208ENST00000540700 MSRAQ9UJ68 235 aa18.9■□□□□ 0.62
UBC-208ENST00000540700 CHD7Q9P2D1 2997 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 DOCK5Q9H7D0 1870 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 DYNC1LI2O43237 492 aaPredicted RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 TGFB3P10600 412 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 GCFC2P16383 781 aaKnown RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 CCSAPQ6IQ19 270 aaPredicted RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 CYFIP1Q7L576 1253 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 SLC5A5Q92911 643 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 FAM122AQ96E09 287 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 MTMR9Q96QG7 549 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 SENP7Q9BQF6 1050 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 UPF3AQ9H1J1 476 aaKnown RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 NKX2-4Q9H2Z4 354 aa18.89■□□□□ 0.61
UBC-208ENST00000540700 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
UBC-208ENST00000540700 IPO5O00410 1097 aaKnown RBP18.88■□□□□ 0.61
UBC-208ENST00000540700 CCNE2O96020 404 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 ASGR1P07306 291 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 PLA2G5P39877 138 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 GJA9P57773 515 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 BEX3Q00994 111 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 HSDL1Q3SXM5 330 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 RILPL1Q5EBL4 403 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 RASIP1Q5U651 963 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 PSRC1Q6PGN9 363 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms