RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 KIF5BP33176 963 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 CTNNB1P35222 781 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 TCEAL5Q5H9L2 206 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 LZTS2Q9BRK4 669 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 C11orf84Q9BUA3 381 aaPredicted RBP14.38□□□□□ -0.11
COPS7A-211ENST00000540408 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
COPS7A-211ENST00000540408 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 CLDND1Q9NY35 253 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 FRMPD4Q14CM0 1322 aa14.38□□□□□ -0.11
COPS7A-211ENST00000540408 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 E7EWF7 191 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 CYP21A2P08686 494 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 SMARCA1P28370 1054 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 TCF7P36402 384 aaPredicted RBP14.37□□□□□ -0.11
COPS7A-211ENST00000540408 ADAM17P78536 824 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 RPAINQ86UA6 219 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 LMBR1Q8WVP7 490 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
COPS7A-211ENST00000540408 C5orf67F2Z3F1 127 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 DCXO43602 365 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 CHRNA1P02708 482 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 RPLP2P05387 115 aaKnown RBP14.36□□□□□ -0.11
COPS7A-211ENST00000540408 BMPR1AP36894 532 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 GNAQP50148 359 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 USP17L6PQ6QN14 398 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 SEPT1Q8WYJ6 367 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 TNPO1Q92973 898 aaKnown RBP14.36□□□□□ -0.11
COPS7A-211ENST00000540408 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 OSBPL7Q9BZF2 842 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 IL25Q9H293 177 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
COPS7A-211ENST00000540408 GHRP10912 638 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 PTH1RQ03431 593 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
COPS7A-211ENST00000540408 TTC22Q5TAA0 569 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 TMTC2Q8N394 836 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 IGDCC4Q8TDY8 1250 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 GLG1Q92896 1179 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 PPP2R3CQ969Q6 453 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
COPS7A-211ENST00000540408 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 RRN3P2A6NIE6 340 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 ENPP3O14638 875 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 MEIS2O14770 477 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 MAFGO15525 162 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 DDAH1O94760 285 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 COL19A1Q14993 1142 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 GRIK4Q16099 956 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 NFXL1Q6ZNB6 911 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 ADHFE1Q8IWW8 467 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 POP1Q99575 1024 aaKnown RBP14.34□□□□□ -0.11
COPS7A-211ENST00000540408 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 TUBE1Q9UJT0 475 aa14.34□□□□□ -0.11
COPS7A-211ENST00000540408 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.11
COPS7A-211ENST00000540408 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 CCDC69A6NI79 296 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 M0QZ92 97 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
COPS7A-211ENST00000540408 CHMLP26374 656 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 MARK3P27448 753 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 ZP2Q05996 745 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 MTMR1Q13613 665 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 LPIN1Q14693 890 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 IER5Q5VY09 327 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 RUFY4Q6ZNE9 571 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 DNAJB3Q8WWF6 145 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 CLP1Q92989 425 aaKnown RBP14.33□□□□□ -0.12
COPS7A-211ENST00000540408 MTA3Q9BTC8 594 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 KCNH6Q9H252 994 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 BRWD1Q9NSI6 2320 aa14.33□□□□□ -0.12
COPS7A-211ENST00000540408 GSTTP1A0A1W2PQM5 241 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 GRM6O15303 877 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 ATP9AO75110 1047 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 CALM1P0DP23 149 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 CALM2P0DP24 149 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 CALM3P0DP25 149 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 KCNA2P16389 499 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 MGAT3Q09327 533 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 NAALADL2Q58DX5 795 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 FBXO47Q5MNV8 452 aa14.32□□□□□ -0.12
COPS7A-211ENST00000540408 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms