RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 NECTIN1Q15223 517 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 UBE2SQ16763 222 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 SEPT8Q92599 483 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 CAND2O75155 1236 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 CALM1P0DP23 149 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 CALM2P0DP24 149 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 CALM3P0DP25 149 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 ADAM17P78536 824 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 HTRA4P83105 476 aaPredicted RBP23.67■■□□□ 1.38
LTBR-205ENST00000535739 ARHGAP4P98171 946 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 LMBR1Q8WVP7 490 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 C17orf80Q9BSJ5 609 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 SLC12A7Q9Y666 1083 aa23.67■■□□□ 1.38
LTBR-205ENST00000535739 NLRC5Q86WI3 1866 aa23.66■■□□□ 1.38
LTBR-205ENST00000535739 KCNA2P16389 499 aa23.66■■□□□ 1.38
LTBR-205ENST00000535739 ITGB5P18084 799 aa23.66■■□□□ 1.38
LTBR-205ENST00000535739 TCF7P36402 384 aaPredicted RBP23.66■■□□□ 1.38
LTBR-205ENST00000535739 GIMAP8Q8ND71 665 aaPredicted RBP23.66■■□□□ 1.38
LTBR-205ENST00000535739 GPRASP2Q96D09 838 aa23.66■■□□□ 1.38
LTBR-205ENST00000535739 ANO2Q9NQ90 1003 aa23.66■■□□□ 1.38
LTBR-205ENST00000535739 TMTC3Q6ZXV5 915 aa23.65■■□□□ 1.38
LTBR-205ENST00000535739 FANCBQ8NB91 859 aa23.65■■□□□ 1.38
LTBR-205ENST00000535739 PKD2L1Q9P0L9 805 aa23.65■■□□□ 1.38
LTBR-205ENST00000535739 NRCAMQ92823 1304 aa23.64■■□□□ 1.38
LTBR-205ENST00000535739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.64■■□□□ 1.37
LTBR-205ENST00000535739 GSTTP1A0A1W2PQM5 241 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 UPP2O95045 317 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 COL9A1P20849 921 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 FAM26DQ5JW98 314 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 MICU3Q86XE3 530 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 FBXO22Q8NEZ5 403 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 SP7Q8TDD2 431 aaPredicted RBP23.64■■□□□ 1.37
LTBR-205ENST00000535739 TOP1MTQ969P6 601 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 CDHR1Q96JP9 859 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 UBIAD1Q9Y5Z9 338 aa23.64■■□□□ 1.37
LTBR-205ENST00000535739 MYO7AQ13402 2215 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 RUFY4Q6ZNE9 571 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 HEATR3Q7Z4Q2 680 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 SKAP1Q86WV1 359 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 SEPT1Q8WYJ6 367 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 PCDHA6Q9UN73 950 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 PCDHA8Q9Y5H6 950 aa23.63■■□□□ 1.37
LTBR-205ENST00000535739 SPDYE3A6NKU9 549 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 CHRNA1P02708 482 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 MARK3P27448 753 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 MTMR1Q13613 665 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 SGMS1Q86VZ5 419 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 YME1L1Q96TA2 773 aa23.62■■□□□ 1.37
LTBR-205ENST00000535739 IFIH1Q9BYX4 1025 aaKnown RBP23.62■■□□□ 1.37
LTBR-205ENST00000535739 LOXHD1Q8IVV2 1947 aa23.61■■□□□ 1.37
LTBR-205ENST00000535739 PPFIA1Q13136 1202 aa23.61■■□□□ 1.37
LTBR-205ENST00000535739 APBB2Q92870 758 aa23.61■■□□□ 1.37
LTBR-205ENST00000535739 JADE2Q9NQC1 790 aa23.61■■□□□ 1.37
LTBR-205ENST00000535739 RAPGEFL1Q9UHV5 662 aa23.61■■□□□ 1.37
LTBR-205ENST00000535739 GHRP10912 638 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 GRIK4Q16099 956 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 EPC2Q52LR7 807 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 GLG1Q92896 1179 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 ERAP1Q9NZ08 941 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 RALGAPA2Q2PPJ7 1873 aa23.6■■□□□ 1.37
LTBR-205ENST00000535739 CNTNAP5Q8WYK1 1306 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 WWC2Q6AWC2 1192 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 TAF2Q6P1X5 1199 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 APOA5Q6Q788 366 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 SYNE3Q6ZMZ3 975 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 RPAINQ86UA6 219 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 TCEANC2Q96MN5 208 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 SMARCAD1Q9H4L7 1026 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 UBE2ZQ9H832 354 aaPredicted RBP23.59■■□□□ 1.37
LTBR-205ENST00000535739 TUBE1Q9UJT0 475 aa23.59■■□□□ 1.37
LTBR-205ENST00000535739 MAFGO15525 162 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 MGAT3Q09327 533 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 MARCH8Q5T0T0 291 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 RNF20Q5VTR2 975 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 TYW1BQ6NUM6 668 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 DNAJB3Q8WWF6 145 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 SAMD11Q96NU1 681 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 NEK1Q96PY6 1258 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 EHMT1Q9H9B1 1298 aa23.58■■□□□ 1.37
LTBR-205ENST00000535739 TTC3P53804 2025 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.57■■□□□ 1.36
LTBR-205ENST00000535739 MBLAC1A4D2B0 266 aaPredicted RBP23.57■■□□□ 1.36
LTBR-205ENST00000535739 IGBP1P78318 339 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 EXOSC10Q01780 885 aaKnown RBP23.57■■□□□ 1.36
LTBR-205ENST00000535739 LPIN1Q14693 890 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 BMP2KLQ5H9B9 411 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 TMEM192Q8IY95 271 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 CYP2W1Q8TAV3 490 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 ZBTB10Q96DT7 871 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 MRPL38Q96DV4 380 aaKnown RBP23.57■■□□□ 1.36
LTBR-205ENST00000535739 PGBD1Q96JS3 809 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 PCYT2Q99447 389 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 MXRA8Q9BRK3 442 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 KCNH7Q9NS40 1196 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 RBM28Q9NW13 759 aaKnown RBP23.57■■□□□ 1.36
LTBR-205ENST00000535739 BRPF3Q9ULD4 1205 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 COL4A6Q14031 1691 aa23.57■■□□□ 1.36
LTBR-205ENST00000535739 H3BNC9 293 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 NAPAP54920 295 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 GPM6BQ13491 265 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms