RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 JPH1Q9HDC5 661 aaPredicted RBP24.29■■□□□ 1.48
PKP3-211ENST00000534401 GJB4Q9NTQ9 266 aa24.29■■□□□ 1.48
PKP3-211ENST00000534401 IGKV6D-21A0A0A0MT36 114 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 JAK2O60674 1132 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 TCF7P36402 384 aaPredicted RBP24.28■■□□□ 1.48
PKP3-211ENST00000534401 ADAM17P78536 824 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 PTGISQ16647 500 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 MOXD1Q6UVY6 613 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 KRT25Q7Z3Z0 450 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 TMEM199Q8N511 208 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 C7orf31Q8N865 590 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 TBCKQ8TEA7 893 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 PPP1R12CQ9BZL4 782 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 EMSYQ7Z589 1322 aa24.28■■□□□ 1.48
PKP3-211ENST00000534401 IPO5O00410 1097 aaKnown RBP24.27■■□□□ 1.48
PKP3-211ENST00000534401 PPIGQ13427 754 aaKnown RBP eCLIP24.27■■□□□ 1.48
PKP3-211ENST00000534401 SHHQ15465 462 aa24.27■■□□□ 1.48
PKP3-211ENST00000534401 TRIM71Q2Q1W2 868 aaKnown RBP24.27■■□□□ 1.48
PKP3-211ENST00000534401 C9orf50Q5SZB4 431 aa24.27■■□□□ 1.48
PKP3-211ENST00000534401 DHX38Q92620 1227 aaKnown RBP24.27■■□□□ 1.48
PKP3-211ENST00000534401 TNFRSF25Q93038 417 aa24.27■■□□□ 1.48
PKP3-211ENST00000534401 SDF4Q9BRK5 362 aa24.27■■□□□ 1.48
PKP3-211ENST00000534401 PKD2L1Q9P0L9 805 aa24.27■■□□□ 1.48
PKP3-211ENST00000534401 WDR81Q562E7 1941 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 CCNE2O96020 404 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 CSF2RAP15509 400 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 ACTR2P61160 394 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 PTK7Q13308 1070 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 Q4G0T1 1027 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 TRIM50Q86XT4 487 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 RNPEPQ9H4A4 650 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 TBC1D22BQ9NU19 505 aa24.26■■□□□ 1.47
PKP3-211ENST00000534401 SMIM10L2AP0DMW4 78 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 SMIM10L2BP0DMW5 78 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 SP4Q02446 784 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 NONOQ15233 471 aaKnown RBP eCLIP24.25■■□□□ 1.473e-6■■□□□ 12.2
PKP3-211ENST00000534401 TMEM240Q5SV17 173 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 UTP14CQ5TAP6 766 aaKnown RBP24.25■■□□□ 1.47
PKP3-211ENST00000534401 RASIP1Q5U651 963 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 ABHD15Q6UXT9 468 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 SERINC5Q86VE9 423 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 CAGE1Q8TC20 777 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 OXER1Q8TDS5 423 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 SMARCAD1Q9H4L7 1026 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 IL23AQ9NPF7 189 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 ZNF215Q9UL58 517 aaPredicted RBP24.25■■□□□ 1.47
PKP3-211ENST00000534401 TANC1Q9C0D5 1861 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 TET1Q8NFU7 2136 aa24.25■■□□□ 1.47
PKP3-211ENST00000534401 SCN5AQ14524 2016 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 SOX1O00570 391 aaPredicted RBP24.24■■□□□ 1.47
PKP3-211ENST00000534401 ZNF200P98182 395 aaPredicted RBP24.24■■□□□ 1.47
PKP3-211ENST00000534401 BFSP2Q13515 415 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 PRR16Q569H4 304 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 PLPPR4Q7Z2D5 763 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 CCDC83Q8IWF9 413 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 ZNF577Q9BSK1 485 aa24.24■■□□□ 1.47
PKP3-211ENST00000534401 MSH4O15457 936 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 CCL23P55773 120 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 CHMP4BP1P59074 171 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 ZNF746Q6NUN9 644 aaPredicted RBP24.23■■□□□ 1.47
PKP3-211ENST00000534401 SLC5A5Q92911 643 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 RIT2Q99578 217 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.23■■□□□ 1.47
PKP3-211ENST00000534401 ERAP1Q9NZ08 941 aa24.23■■□□□ 1.47
PKP3-211ENST00000534401 NRCAMQ92823 1304 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 C17orf102A2RUQ5 167 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 MMP1P03956 469 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 IQCF3P0C7M6 154 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 RFC2P35250 354 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 GPNMBQ14956 572 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 TRAF7Q6Q0C0 670 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 B3GNT9Q6UX72 402 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 AFAP1L1Q8TED9 768 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 WNT8BQ93098 351 aa24.22■■□□□ 1.47
PKP3-211ENST00000534401 LAMA2P24043 3122 aaKnown RBP24.22■■□□□ 1.47
PKP3-211ENST00000534401 MYH9P35579 1960 aaKnown RBP24.22■■□□□ 1.47
PKP3-211ENST00000534401 ST18O60284 1047 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 CD2BP2O95400 341 aaKnown RBP24.21■■□□□ 1.47
PKP3-211ENST00000534401 HMGN5P82970 282 aaKnown RBP24.21■■□□□ 1.47
PKP3-211ENST00000534401 INF2Q27J81 1249 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 EARS2Q5JPH6 523 aaKnown RBP24.21■■□□□ 1.47
PKP3-211ENST00000534401 KRT40Q6A162 431 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 PPP4R3AQ6IN85 833 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 GPR153Q6NV75 609 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 CCDC155Q8N6L0 562 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 NOD1Q9Y239 953 aa24.21■■□□□ 1.47
PKP3-211ENST00000534401 CCDC194A0A1B0GVG4 234 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 MBLAC1A4D2B0 266 aaPredicted RBP24.2■■□□□ 1.46
PKP3-211ENST00000534401 PSMD10O75832 226 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 TDP2O95551 362 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 GNAT1P11488 350 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 CKBP12277 381 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 SLC26A2P50443 739 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 KRT76Q01546 638 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 NR5A1Q13285 461 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 PSRC1Q6PGN9 363 aaPredicted RBP24.2■■□□□ 1.46
PKP3-211ENST00000534401 ZNF365Q70YC5 407 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 RPAINQ86UA6 219 aa24.2■■□□□ 1.46
PKP3-211ENST00000534401 RPUSD2Q8IZ73 545 aaKnown RBP24.2■■□□□ 1.46
PKP3-211ENST00000534401 ETNPPLQ8TBG4 499 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms