RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MXRA8Q9BRK3 442 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 FTOQ9C0B1 505 aaKnown RBP eCLIP11.04□□□□□ -0.64
SSBP3-215ENST00000533946 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
SSBP3-215ENST00000533946 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 NOD1Q9Y239 953 aa11.04□□□□□ -0.64
SSBP3-215ENST00000533946 NID2Q14112 1375 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 IGLV3-22A0A075B6J6 115 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
SSBP3-215ENST00000533946 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
SSBP3-215ENST00000533946 CTDNEP1O95476 244 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 SUPT20HL2P0C7V6 817 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 SELPP16109 830 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 THPOP40225 353 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 MTMR1Q13613 665 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 NECAB1Q8N987 351 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 SLC17A8Q8NDX2 589 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
SSBP3-215ENST00000533946 SLC4A7Q9Y6M7 1214 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 C5orf42Q9H799 3197 aa11.03□□□□□ -0.64
SSBP3-215ENST00000533946 PRRC2BQ5JSZ5 2229 aaKnown RBP11.03□□□□□ -0.64
SSBP3-215ENST00000533946 KAT6AQ92794 2004 aa11.02□□□□□ -0.64
SSBP3-215ENST00000533946 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 MEIS1O00470 390 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 NOP56O00567 594 aaKnown RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 REC8O95072 547 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 CHRNA1P02708 482 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 CA3P07451 260 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 ATP2A2P16615 1042 aaKnown RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 ATP4AP20648 1035 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 SREBF1P36956 1147 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 WDR5P61964 334 aaKnown RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 IGBP1P78318 339 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 ARHGAP4P98171 946 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 ST3GAL1Q11201 340 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 PTK7Q13308 1070 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 NEDD9Q14511 834 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 CCDC85BQ15834 202 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-215ENST00000533946 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 RETREG2Q8NC44 543 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 DBF4BQ8NFT6 615 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 LENG9Q96B70 501 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 GPRASP2Q96D09 838 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
SSBP3-215ENST00000533946 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 LGR5O75473 907 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 CXCL10P02778 98 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 IFNAR1P17181 557 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 ACTR2P61160 394 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 RBL2Q08999 1139 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 TMEM62Q0P6H9 643 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 SCRN1Q12765 414 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 TRAF1Q13077 416 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 BFSP2Q13515 415 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 CEP55Q53EZ4 464 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
SSBP3-215ENST00000533946 TRMT1LQ7Z2T5 733 aaKnown RBP11.01□□□□□ -0.65
SSBP3-215ENST00000533946 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
SSBP3-215ENST00000533946 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-215ENST00000533946 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 ZMYND12Q9H0C1 365 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 PDRG1Q9NUG6 133 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 CYP46A1Q9Y6A2 500 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 EVPLQ92817 2033 aa11.01□□□□□ -0.65
SSBP3-215ENST00000533946 STAM2O75886 525 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 INSRRP14616 1297 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 FOSL2P15408 326 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 FOSBP53539 338 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 AK2P54819 239 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 TAP1Q03518 808 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 PLCB4Q15147 1175 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 GRIK4Q16099 956 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 XRRA1Q6P2D8 792 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 PLA2G4DQ86XP0 818 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 HERC6Q8IVU3 1022 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 SEPT1Q8WYJ6 367 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 SEZ6LQ9BYH1 1024 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
SSBP3-215ENST00000533946 COL4A4P53420 1690 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 COL4A6Q14031 1691 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 MYO7AQ13402 2215 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-215ENST00000533946 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 RSPH10B2B2RC85 870 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 ZBTB42B2RXF5 422 aa10.99□□□□□ -0.65
SSBP3-215ENST00000533946 M0R2N6 131 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms