RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 SDR42E1Q8WUS8 393 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 ZNF274Q96GC6 653 aaPredicted RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 GBP4Q96PP9 640 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 PLCD4Q9BRC7 762 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 LLPHQ9BRT6 129 aaKnown RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 LRRC2Q9BYS8 371 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 CRNKL1Q9BZJ0 848 aaKnown RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 KRT23Q9C075 422 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 TMX4Q9H1E5 349 aaPredicted RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 OSBPL2Q9H1P3 480 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 RNF41Q9H4P4 317 aaPredicted RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 CNNM2Q9H8M5 875 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 DCP1AQ9NPI6 582 aaPredicted RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 ATP8A2Q9NTI2 1148 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 AATFQ9NY61 560 aaKnown RBP eCLIP6.65□□□□□ -1.34
CHKA-208ENST00000533910 ARPP21Q9UBL0 812 aaPredicted RBP6.65□□□□□ -1.34
CHKA-208ENST00000533910 SMC3Q9UQE7 1217 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 JAG2Q9Y219 1238 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 TACC3Q9Y6A5 838 aa6.65□□□□□ -1.34
CHKA-208ENST00000533910 COL4A5P29400 1685 aa6.65□□□□□ -1.35
CHKA-208ENST00000533910 SIPA1L1O43166 1804 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 TCHHQ07283 1943 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 GREB1LQ9C091 1923 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 GPR75-ASB3A0A0A6YYF3 556 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 ELOA3DA6NLF2 546 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 B4E1Z4 1266 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 RGS9O75916 674 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 ALBP02768 609 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 LDHCP07864 332 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 KCNA3P22001 575 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 ARNTP27540 789 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 GJB2P29033 226 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 NT5C2P49902 561 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 GSTM4Q03013 218 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 CLCQ05315 142 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 SCRN1Q12765 414 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 ELOA3BQ3SY89 546 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 MAP1SQ66K74 1059 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 LLGL2Q6P1M3 1020 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 GK5Q6ZS86 529 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 MFSD6Q6ZSS7 791 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 CYB5R4Q7L1T6 521 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 SGMS1Q86VZ5 419 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 SLITRK4Q8IW52 837 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 CERS5Q8N5B7 392 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 FAM169BQ8N8A8 192 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 NECAB1Q8N987 351 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 SUPT20HQ8NEM7 779 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 ELOA3Q8NG57 546 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 SMARCC2Q8TAQ2 1214 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 ZNF526Q8TF50 670 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 GAL3ST3Q96A11 431 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 CHMP4CQ96CF2 233 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 TMEM87BQ96K49 555 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 MTFR1LQ9H019 292 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 JPH1Q9HDC5 661 aaPredicted RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 ANGEL1Q9UNK9 670 aaKnown RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHKA-208ENST00000533910 WDR33Q9C0J8 1336 aaKnown RBP6.64□□□□□ -1.35
CHKA-208ENST00000533910 MYH6P13533 1939 aa6.64□□□□□ -1.35
CHKA-208ENST00000533910 STX6O43752 255 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 ORC4O43929 436 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 GRIN3BO60391 1043 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 BAG4O95429 457 aaKnown RBP6.63□□□□□ -1.35
CHKA-208ENST00000533910 BAG3O95817 575 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 CTSBP07858 339 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 SELPP16109 830 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 PDCP20941 246 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 SYT1P21579 422 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 COL8A1P27658 744 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 PDIA3P30101 505 aaKnown RBP6.63□□□□□ -1.35
CHKA-208ENST00000533910 LIFRP42702 1097 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 RCAN1P53805 252 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 RHBDL3P58872 404 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 KIAA2012Q0VF49 1180 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 CCDC93Q567U6 631 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 CTR9Q6PD62 1173 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 ZNF662Q6ZS27 426 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 CHST3Q7LGC8 479 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 PDZD3Q86UT5 571 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 CKAP2LQ8IYA6 745 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 TTLL6Q8N841 843 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 NSUN7Q8NE18 718 aaKnown RBP6.63□□□□□ -1.35
CHKA-208ENST00000533910 IGDCC4Q8TDY8 1250 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 SH3RF3Q8TEJ3 882 aaPredicted RBP6.63□□□□□ -1.35
CHKA-208ENST00000533910 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
CHKA-208ENST00000533910 LY9Q9HBG7 655 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 DAGLAQ9Y4D2 1042 aa6.63□□□□□ -1.35
CHKA-208ENST00000533910 FLT1P17948 1338 aa6.62□□□□□ -1.35
CHKA-208ENST00000533910 KLF18A0A0U1RQI7 1052 aa6.62□□□□□ -1.35
CHKA-208ENST00000533910 PTPDC1A2A3K4 754 aa6.62□□□□□ -1.35
CHKA-208ENST00000533910 CCDC85CA6NKD9 419 aa6.62□□□□□ -1.35
CHKA-208ENST00000533910 GOLGA8BA8MQT2 603 aa6.62□□□□□ -1.35
CHKA-208ENST00000533910 SMAD7O15105 426 aaKnown RBP6.62□□□□□ -1.35
CHKA-208ENST00000533910 ECE2O60344 883 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms