RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 ATP6V1C1P21283 382 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 CXCR5P32302 372 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 MYBPC3Q14896 1274 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 SPA17Q15506 151 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 DBN1Q16643 649 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 RABL6Q3YEC7 729 aaPredicted RBP22.68■■□□□ 1.22
GSDMD-211ENST00000531184 DPY19L2Q6NUT2 758 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 SLC51AQ86UW1 340 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 RAB11FIP4Q86YS3 637 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 FAM163AQ96GL9 167 aaPredicted RBP22.68■■□□□ 1.22
GSDMD-211ENST00000531184 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.68■■□□□ 1.22
GSDMD-211ENST00000531184 NOVA2Q9UNW9 492 aaKnown RBP22.68■■□□□ 1.22
GSDMD-211ENST00000531184 TAF1P21675 1872 aa22.68■■□□□ 1.22
GSDMD-211ENST00000531184 IGF2BP3O00425 579 aaKnown RBP eCLIP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 HOXA10P31260 410 aaPredicted RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 CTNNA1P35221 906 aaKnown RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 PSMC4P43686 418 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 TOB1P50616 345 aaPredicted RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 PAK1Q13153 545 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 UAP1Q16222 522 aaPredicted RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 MYH13Q9UKX3 1938 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 ITGA6P23229 1130 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 AFMP43652 599 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 CYP27A1Q02318 531 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 RILPL1Q5EBL4 403 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 TRIM68Q6AZZ1 485 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 RETREG2Q8NC44 543 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 ZNF507Q8TCN5 953 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 KIFAP3Q92845 792 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 CELF1Q92879 486 aaKnown RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 UBE2OQ9C0C9 1292 aaKnown RBP22.67■■□□□ 1.22
GSDMD-211ENST00000531184 ARHGEF3Q9NR81 526 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 SAMD15Q9P1V8 674 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 PIM2Q9P1W9 311 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 CTNNAL1Q9UBT7 734 aa22.67■■□□□ 1.22
GSDMD-211ENST00000531184 COL4A1P02462 1669 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MOCS3O95396 460 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MSH2P43246 934 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MAGOHP61326 146 aaKnown RBP22.66■■□□□ 1.22
GSDMD-211ENST00000531184 LMNB2Q03252 620 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MAGOHBQ96A72 148 aaKnown RBP22.66■■□□□ 1.22
GSDMD-211ENST00000531184 TTYH3Q9C0H2 523 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 ISCUQ9H1K1 167 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MYH3P11055 1940 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 CTNND1O60716 968 aaKnown RBP22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MYBL1P10243 752 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 GNAZP19086 355 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 SP100P23497 879 aaPredicted RBP22.66■■□□□ 1.22
GSDMD-211ENST00000531184 ANTXR2P58335 489 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MTMR3Q13615 1198 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 PABPC1LQ4VXU2 614 aaKnown RBP22.66■■□□□ 1.22
GSDMD-211ENST00000531184 CCDC178Q5BJE1 867 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 STYK1Q6J9G0 422 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 TRIM42Q8IWZ5 723 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 OR2W6PQ8NHA6 318 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 IFT43Q96FT9 208 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 IFT74Q96LB3 600 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 ECT2Q9H8V3 914 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 MLXIPQ9HAP2 919 aa22.66■■□□□ 1.22
GSDMD-211ENST00000531184 GRID2IPA4D2P6 1211 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 BAG3O95817 575 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 MYBP10242 640 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 ZBED6P86452 979 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 GALNTL6Q49A17 601 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 USP49Q70CQ1 688 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 SESTD1Q86VW0 696 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 GBP7Q8N8V2 638 aaPredicted RBP22.65■■□□□ 1.22
GSDMD-211ENST00000531184 PSMB7Q99436 277 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 TLR10Q9BXR5 811 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 RAB17Q9H0T7 212 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 CSRNP2Q9H175 543 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
GSDMD-211ENST00000531184 PDS5AQ29RF7 1337 aaKnown RBP22.65■■□□□ 1.22
GSDMD-211ENST00000531184 MAST3O60307 1309 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 ZNF263O14978 683 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 PENKP01210 267 aaPredicted RBP22.65■■□□□ 1.22
GSDMD-211ENST00000531184 KRT16P08779 473 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 KLC1Q07866 573 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 CUL1Q13616 776 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 TTLL6Q8N841 843 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 VCXQ9H320 206 aa22.65■■□□□ 1.22
GSDMD-211ENST00000531184 AATFQ9NY61 560 aaKnown RBP eCLIP22.65■■□□□ 1.22
GSDMD-211ENST00000531184 EIF4E1BA6NMX2 242 aaKnown RBP22.64■■□□□ 1.21
GSDMD-211ENST00000531184 HIP1RO75146 1068 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 ALDH1B1P30837 517 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 PCK1P35558 622 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 SCNN1BP51168 640 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 IFIT5Q13325 482 aaKnown RBP22.64■■□□□ 1.21
GSDMD-211ENST00000531184 KLHDC4Q8TBB5 520 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 ZNF594Q96JF6 807 aaPredicted RBP22.64■■□□□ 1.21
GSDMD-211ENST00000531184 CRAMP1Q96RY5 1269 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 SLX1AQ9BQ83 275 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 IFIH1Q9BYX4 1025 aaKnown RBP22.64■■□□□ 1.21
GSDMD-211ENST00000531184 INCENPQ9NQS7 918 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
GSDMD-211ENST00000531184 A8MUI8 341 aa22.63■■□□□ 1.21
GSDMD-211ENST00000531184 UBOX5O94941 541 aa22.63■■□□□ 1.21
GSDMD-211ENST00000531184 GBP1P32455 592 aa22.63■■□□□ 1.21
GSDMD-211ENST00000531184 METAP2P50579 478 aaKnown RBP eCLIP22.63■■□□□ 1.21
GSDMD-211ENST00000531184 RRAGBQ5VZM2 374 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms