RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TBC1D22BQ9NU19 505 aa11.09□□□□□ -0.63
CTNND1-228ENST00000531007 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
CTNND1-228ENST00000531007 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
CTNND1-228ENST00000531007 FSD2A1L4K1 749 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 MSH4O15457 936 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
CTNND1-228ENST00000531007 CNMDO75829 334 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 SLC10A3P09131 477 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 STAT6P42226 847 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 GRIN1Q05586 938 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTNND1-228ENST00000531007 PPP2R5CQ13362 524 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 KCTD2Q14681 263 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-228ENST00000531007 HYIQ5T013 277 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 CABP7Q86V35 215 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
CTNND1-228ENST00000531007 NAT10Q9H0A0 1025 aaKnown RBP11.08□□□□□ -0.64
CTNND1-228ENST00000531007 ANO10Q9NW15 660 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
CTNND1-228ENST00000531007 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
CTNND1-228ENST00000531007 NR3C2P08235 984 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 FCER1AP12319 257 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 ERCC3P19447 782 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 MRE11P49959 708 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-228ENST00000531007 MTMR1Q13613 665 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 POSTNQ15063 836 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 CAMK4Q16566 473 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 FAM110CQ1W6H9 321 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 LRCH2Q5VUJ6 765 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-228ENST00000531007 RDM1Q8NG50 284 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 ZNF577Q9BSK1 485 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 FUCA2Q9BTY2 467 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 TEKT3Q9BXF9 490 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 TUBE1Q9UJT0 475 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 MRVI1Q9Y6F6 885 aa11.07□□□□□ -0.64
CTNND1-228ENST00000531007 SMCHD1A6NHR9 2005 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 IPO5O00410 1097 aaKnown RBP11.06□□□□□ -0.64
CTNND1-228ENST00000531007 GAS7O60861 476 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 PSMD10O75832 226 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 ALDH1A1P00352 501 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 TGFB3P10600 412 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 TAL1P17542 331 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-228ENST00000531007 RPA1P27694 616 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 MAPK4P31152 587 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 ICAM3P32942 547 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 HTRA3P83110 453 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 STXBP2Q15833 593 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 STX1AQ16623 288 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 UVSSAQ2YD98 709 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 SPECC1Q5M775 1068 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 USP49Q70CQ1 688 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 OTOP1Q7RTM1 612 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 FAM133AQ8N9E0 248 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 CCDC47Q96A33 483 aaKnown RBP11.06□□□□□ -0.64
CTNND1-228ENST00000531007 DHX58Q96C10 678 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-228ENST00000531007 GSDMAQ96QA5 445 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 MMP19Q99542 508 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 POLR3CQ9BUI4 534 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-228ENST00000531007 TUFT1Q9NNX1 390 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 KCNH7Q9NS40 1196 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 KBTBD4Q9NVX7 518 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
CTNND1-228ENST00000531007 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 ITGB5P18084 799 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 EIF2AK2P19525 551 aaKnown RBP11.05□□□□□ -0.64
CTNND1-228ENST00000531007 EDNRBP24530 442 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 SFNP31947 248 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 TM4SF4P48230 202 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-228ENST00000531007 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
CTNND1-228ENST00000531007 KRT76Q01546 638 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 TYRO3Q06418 890 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 SPIRE1Q08AE8 756 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 EPHA7Q15375 998 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 PDXDC2PQ6P474 469 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 CNNM4Q6P4Q7 775 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
CTNND1-228ENST00000531007 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms