RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 STAG2Q8N3U4 1231 aa12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 ENAHQ8N8S7 591 aaPredicted RBP12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 ESR2Q92731 530 aa12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 PTPRZ1P23471 2315 aaPredicted RBP12.42□□□□□ -0.42
TM9SF1-210ENST00000530563 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 DGKIO75912 1065 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 GLP2RO95838 553 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 MRPS9P82933 396 aaKnown RBP12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 MGAT3Q09327 533 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 COASYQ13057 564 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 LPIN1Q14693 890 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 LMBR1Q8WVP7 490 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 GPR20Q99678 358 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 PRRX2Q99811 253 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 PLVAPQ9BX97 442 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 MLXIPQ9HAP2 919 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 DNAH14Q0VDD8 3507 aa12.41□□□□□ -0.42
TM9SF1-210ENST00000530563 TTC3P53804 2025 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 KDM4AO75164 1064 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 ITGB1P05556 798 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 ICAM3P32942 547 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 PDE1AP54750 535 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 VCPP55072 806 aaKnown RBP12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 P2RX5Q93086 422 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 INPP4AQ96PE3 977 aaPredicted RBP12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 KAT14Q9H8E8 782 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 FAM86C1Q9NVL1 165 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 MRPL42Q9Y6G3 142 aaKnown RBP12.4□□□□□ -0.42
TM9SF1-210ENST00000530563 CCDC171Q6TFL3 1326 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 GVINP1Q7Z2Y8 2422 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 ZBTB5O15062 677 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 GHRP10912 638 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 GNAT1P11488 350 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 NT5C2P49902 561 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 BTG3Q14201 252 aaPredicted RBP12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
TM9SF1-210ENST00000530563 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 B4E1Z4 1266 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 GFRA3O60609 400 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 CSPG5O95196 566 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 CCND2P30279 289 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 AVPR2P30518 371 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 NDUFV1P49821 464 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 NAALADL2Q58DX5 795 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 MARCH8Q5T0T0 291 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 SUSD6Q92537 303 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 PCDHGC5Q9Y5F6 944 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 MYH6P13533 1939 aa12.38□□□□□ -0.43
TM9SF1-210ENST00000530563 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 MBLAC1A4D2B0 266 aaPredicted RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 KLRF2D3W0D1 207 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 ZNF213O14771 459 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 DHX16O60231 1041 aaKnown RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 POLR2MP0CAP2 368 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 NRIP1P48552 1158 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 NEDD9Q14511 834 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 SEC23AQ15436 765 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 KLHL23Q8NBE8 558 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 VN1R2Q8NFZ6 395 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 PHF7Q9BWX1 381 aaPredicted RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
TM9SF1-210ENST00000530563 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
TM9SF1-210ENST00000530563 PLXNA3P51805 1871 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms