RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 STAMQ92783 540 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 CALML4Q96GE6 196 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 MAN1B1Q9UKM7 699 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
TTC39A-216ENST00000530004 MEIS1O00470 390 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 SMC2O95347 1197 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 ELNP15502 786 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 PLCG1P19174 1290 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 CASP1P29466 404 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 SARSP49591 514 aaKnown RBP16.15■□□□□ 0.18
TTC39A-216ENST00000530004 KRT79Q5XKE5 535 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 FAM20AQ96MK3 541 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 WDR11Q9BZH6 1224 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 NAT10Q9H0A0 1025 aaKnown RBP16.15■□□□□ 0.18
TTC39A-216ENST00000530004 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 PLXNA1Q9UIW2 1896 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 MSH4O15457 936 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 DPYDQ12882 1025 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 GNPTABQ3T906 1256 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 MFSD14CQ5VZR4 134 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 NIPA1Q7RTP0 329 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
TTC39A-216ENST00000530004 PLA2G4DQ86XP0 818 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 FBXO16Q8IX29 292 aaPredicted RBP16.15■□□□□ 0.18
TTC39A-216ENST00000530004 SPATA20Q8TB22 786 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 LRRC15Q8TF66 581 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 GPRASP2Q96D09 838 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 MTRQ99707 1265 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 VTA1Q9NP79 307 aa16.15■□□□□ 0.18
TTC39A-216ENST00000530004 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
TTC39A-216ENST00000530004 GRB10Q13322 594 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 MTMR1Q13613 665 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 ACVR2BQ13705 512 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 BLZF1Q9H2G9 400 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 CASP8AP2Q9UKL3 1982 aa16.14■□□□□ 0.17
TTC39A-216ENST00000530004 MAFGO15525 162 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 GTPBP6O43824 516 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-216ENST00000530004 HMGCRP04035 888 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 GRK4P32298 578 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 ICAM3P32942 547 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 IQCB1Q15051 598 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 PRAMEF19Q5SWL8 479 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 MAGEF1Q9HAY2 307 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 ARP10275 920 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 TRIM32Q13049 653 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 SEMA3FQ13275 785 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 CUL4BQ13620 913 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 MORC3Q14149 939 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 KBTBD4Q9NVX7 518 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
TTC39A-216ENST00000530004 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
TTC39A-216ENST00000530004 LRRC37A2A6NM11 1700 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 BECN2A8MW95 431 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 SPATA31C2B4DYI2 1134 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-216ENST00000530004 CYBAP13498 195 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 BMP6P22004 513 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-216ENST00000530004 SPIRE1Q08AE8 756 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
TTC39A-216ENST00000530004 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 BPIFA3Q9BQP9 254 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 VAV3Q9UKW4 847 aa16.12■□□□□ 0.17
TTC39A-216ENST00000530004 KDM3AQ9Y4C1 1321 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 RBM47A0AV96 593 aaKnown RBP16.11■□□□□ 0.17
TTC39A-216ENST00000530004 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 TGFB3P10600 412 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
TTC39A-216ENST00000530004 CCDC173Q0VFZ6 552 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 TMEM119Q4V9L6 283 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 KCNV1Q6PIU1 500 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 AOPEPQ8N6M6 819 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 SLC5A5Q92911 643 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 STK17AQ9UEE5 414 aa16.11■□□□□ 0.17
TTC39A-216ENST00000530004 ATP9AO75110 1047 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 ARIH2O95376 493 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 ADCYAP1R1P41586 468 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms