RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SFMBT1Q9UHJ3 866 aa6.6□□□□□ -1.35
C11orf88-204ENST00000529661 RAPGEFL1Q9UHV5 662 aa6.6□□□□□ -1.35
C11orf88-204ENST00000529661 ARVCFO00192 962 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 RASGRP1O95267 797 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 PYGMP11217 842 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 KRT15P19012 456 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
C11orf88-204ENST00000529661 DNM2P50570 870 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 ADAM9Q13443 819 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 ARHGAP36Q6ZRI8 547 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 EP400NLQ6ZTU2 488 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 KCTD1Q719H9 257 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 SYNPOQ8N3V7 929 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 SLC7A14Q8TBB6 771 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 CLIC6Q96NY7 704 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 TMEM209Q96SK2 561 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 CROTQ9UKG9 612 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 TELO2Q9Y4R8 837 aa6.59□□□□□ -1.35
C11orf88-204ENST00000529661 A0A0G2JLL6 359 aaPredicted RBP6.58□□□□□ -1.36
C11orf88-204ENST00000529661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.58□□□□□ -1.36
C11orf88-204ENST00000529661 WNT9AO14904 365 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 EFCAB14O75071 495 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 PDE6AP16499 860 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 GYS2P54840 703 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 GJA9P57773 515 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 PAN2Q504Q3 1202 aaKnown RBP6.58□□□□□ -1.36
C11orf88-204ENST00000529661 FAM47CQ5HY64 1035 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 PRAMEF18Q5VWM3 479 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 C20orf173Q96LM9 149 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 MAGEB10Q96LZ2 347 aaPredicted RBP6.58□□□□□ -1.36
C11orf88-204ENST00000529661 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 ADAM7Q9H2U9 754 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 CBLCQ9ULV8 474 aa6.58□□□□□ -1.36
C11orf88-204ENST00000529661 CCDC163A0A0D9SF12 145 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 CCDC66A2RUB6 948 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 DDX3XO00571 662 aaKnown RBP eCLIP6.57□□□□□ -1.36
C11orf88-204ENST00000529661 GSTA4O15217 222 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 FAHP16930 419 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 TCEA2Q15560 299 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 GPR19Q15760 415 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 CRY1Q16526 586 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 PHF19Q5T6S3 580 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 VASNQ6EMK4 673 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 PTRH1Q86Y79 214 aaKnown RBP6.57□□□□□ -1.36
C11orf88-204ENST00000529661 CISD2Q8N5K1 135 aaKnown RBP6.57□□□□□ -1.36
C11orf88-204ENST00000529661 GSTCDQ8NEC7 633 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 ADAMTS17Q8TE56 1095 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 SH3RF2Q8TEC5 729 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 WASF3Q9UPY6 502 aa6.57□□□□□ -1.36
C11orf88-204ENST00000529661 KCNK3O14649 394 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 PPM1GO15355 546 aaPredicted RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 JAM2P57087 298 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 TKFCQ3LXA3 575 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 TRIM61Q5EBN2 209 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 RNF187Q5TA31 235 aaPredicted RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 MCTP2Q6DN12 878 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 C16orf59Q7L2K0 433 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 ZNF761Q86XN6 746 aaPredicted RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 ANKRD13AQ8IZ07 590 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 NLGN4XQ8N0W4 816 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 DDX1Q92499 740 aaKnown RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 FEZ1Q99689 392 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 MRPL4Q9BYD3 311 aaKnown RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
C11orf88-204ENST00000529661 RIC8BQ9NVN3 520 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 SRPK3Q9UPE1 567 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 COQ6Q9Y2Z9 468 aa6.56□□□□□ -1.36
C11orf88-204ENST00000529661 MAN2B1O00754 1011 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 PPP1R12AO14974 1030 aaPredicted RBP6.55□□□□□ -1.36
C11orf88-204ENST00000529661 RAPGEF3O95398 923 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 ASMTLO95671 621 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 AMY2AP04746 511 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 CKMP06732 381 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 AMY2BP19961 511 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 EPHA5P54756 1037 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 NFIXQ14938 502 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 RTP5Q14D33 572 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 RGL3Q3MIN7 710 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 BTBD8Q5XKL5 378 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 FGD2Q7Z6J4 655 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 PROSER1Q86XN7 944 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 SCLYQ96I15 445 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 GPATCH3Q96I76 525 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 WRNIP1Q96S55 665 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 BRINP2Q9C0B6 783 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
C11orf88-204ENST00000529661 L2HGDHQ9H9P8 463 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 IFT57Q9NWB7 429 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 HSPBP1Q9NZL4 362 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 PRKAB1Q9Y478 270 aa6.55□□□□□ -1.36
C11orf88-204ENST00000529661 ATP23Q9Y6H3 246 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms