RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 NRCAMQ92823 1304 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 CALM1P0DP23 149 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 CALM2P0DP24 149 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 CALM3P0DP25 149 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 MARK3P27448 753 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 TCF7P36402 384 aaPredicted RBP13.94□□□□□ -0.18
USH1C-208ENST00000529563 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 GPM6BQ13491 265 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 TMEM31Q5JXX7 168 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 MAP4K1Q92918 833 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
USH1C-208ENST00000529563 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
USH1C-208ENST00000529563 SIP14410 1827 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
USH1C-208ENST00000529563 PLEKHA8P1O95397 391 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 GHRP10912 638 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 RXRAP19793 462 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 CTNNB1P35222 781 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 IGBP1P78318 339 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 HTRA4P83105 476 aaPredicted RBP13.93□□□□□ -0.18
USH1C-208ENST00000529563 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 MTMR1Q13613 665 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 TMEM192Q8IY95 271 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
USH1C-208ENST00000529563 FIBCD1Q8N539 461 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 SEPT1Q8WYJ6 367 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 TOP1MTQ969P6 601 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 IL17RAQ96F46 866 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 EPHX3Q9H6B9 360 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
USH1C-208ENST00000529563 XIRP2A4UGR9 3374 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 M0QZ92 97 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
USH1C-208ENST00000529563 MEIS2O14770 477 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 HOXC8P31273 242 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 GRIK4Q16099 956 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 UBE2SQ16763 222 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 LEXMQ3ZCV2 418 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 PTCRAQ6ISU1 281 aaPredicted RBP13.92□□□□□ -0.18
USH1C-208ENST00000529563 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
USH1C-208ENST00000529563 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
USH1C-208ENST00000529563 TNPO1Q92973 898 aaKnown RBP13.92□□□□□ -0.18
USH1C-208ENST00000529563 MTA3Q9BTC8 594 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 SMARCAD1Q9H4L7 1026 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 ANO2Q9NQ90 1003 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 FAM50BQ9Y247 325 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 REV3LO60673 3130 aa13.92□□□□□ -0.18
USH1C-208ENST00000529563 MICAL3Q7RTP6 2002 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 H3BNC9 293 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 CSPG5O95196 566 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 PUS10Q3MIT2 529 aaKnown RBP13.91□□□□□ -0.18
USH1C-208ENST00000529563 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 RWDD3Q9Y3V2 267 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
USH1C-208ENST00000529563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 H3BQ06 376 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 SLC27A2O14975 620 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 ATP9AO75110 1047 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 PLA2G5P39877 138 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 GJD3Q8N144 294 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 DNAJB3Q8WWF6 145 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 SDF4Q9BRK5 362 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 ESYT1Q9BSJ8 1104 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 C11orf84Q9BUA3 381 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 CLDND1Q9NY35 253 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
USH1C-208ENST00000529563 PCDHA6Q9UN73 950 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 TELO2Q9Y4R8 837 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 PCDHA8Q9Y5H6 950 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
USH1C-208ENST00000529563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
USH1C-208ENST00000529563 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
USH1C-208ENST00000529563 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
USH1C-208ENST00000529563 MAFGO15525 162 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms