RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
VPS11-203ENST00000529545 CCDC171Q6TFL3 1326 aa10.46□□□□□ -0.73
VPS11-203ENST00000529545 RALGAPA2Q2PPJ7 1873 aa10.46□□□□□ -0.74
VPS11-203ENST00000529545 A0A0D9SFI3 127 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 NOP56O00567 594 aaKnown RBP10.45□□□□□ -0.74
VPS11-203ENST00000529545 ZNF213O14771 459 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 CTSHP09668 335 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 IRS1P35568 1242 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 TRAF1Q13077 416 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 COL19A1Q14993 1142 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 SMAD2Q15796 467 aaKnown RBP10.45□□□□□ -0.74
VPS11-203ENST00000529545 HSDL1Q3SXM5 330 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 SAMD3Q8N6K7 520 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 PPP2R3CQ969Q6 453 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
VPS11-203ENST00000529545 COL4A6Q14031 1691 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 TREHO43280 583 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 MBTPS2O43462 519 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 KDM4AO75164 1064 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 SMIM10L2AP0DMW4 78 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 SMIM10L2BP0DMW5 78 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
VPS11-203ENST00000529545 CCND2P30279 289 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 BMPR1AP36894 532 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 HSD17B4P51659 736 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
VPS11-203ENST00000529545 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
VPS11-203ENST00000529545 HIC1Q14526 733 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 CLUL1Q15846 466 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 PKN1Q16512 942 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
VPS11-203ENST00000529545 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 STOX1Q6ZVD7 989 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 VSIG10LQ86VR7 867 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 RNF135Q8IUD6 432 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 TBC1D10CQ8IV04 446 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
VPS11-203ENST00000529545 PRRX2Q99811 253 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 USP26Q9BXU7 913 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 IGFLR1Q9H665 355 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 JMJD4Q9H9V9 463 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
VPS11-203ENST00000529545 NEDD4P46934 1319 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.43□□□□□ -0.74
VPS11-203ENST00000529545 C5orf67F2Z3F1 127 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 STXBP3O00186 592 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 LGALS2P05162 132 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 LTBRP36941 435 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 PDE1AP54750 535 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 PTPN5P54829 565 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 NEDD9Q14511 834 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 PGM5Q15124 567 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 CTC1Q2NKJ3 1217 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 GNPTABQ3T906 1256 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
VPS11-203ENST00000529545 EDAQ92838 391 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 SNX27Q96L92 541 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
VPS11-203ENST00000529545 PCDHA1Q9Y5I3 950 aa10.43□□□□□ -0.74
VPS11-203ENST00000529545 SALL3Q9BXA9 1300 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 B4E1Z4 1266 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 GCOM1H8Y6P7 765 aaPredicted RBP10.42□□□□□ -0.74
VPS11-203ENST00000529545 ZBTB5O15062 677 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 GRM6O15303 877 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 RGS20O76081 388 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
VPS11-203ENST00000529545 HOXC8P31273 242 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 NDUFV1P49821 464 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 SP2Q02086 613 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 GHRHRQ02643 423 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 HYAL1Q12794 435 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 BTG3Q14201 252 aaPredicted RBP10.42□□□□□ -0.74
VPS11-203ENST00000529545 RSPH3Q86UC2 560 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 SUGP1Q8IWZ8 645 aaKnown RBP10.42□□□□□ -0.74
VPS11-203ENST00000529545 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 PBXIP1Q96AQ6 731 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 SETD4Q9NVD3 440 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 PCDHB15Q9Y5E8 787 aa10.42□□□□□ -0.74
VPS11-203ENST00000529545 ADGRA3Q8IWK6 1321 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 STAM2O75886 525 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 CSPG5O95196 566 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 ARHGAP4P98171 946 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 DLX2Q07687 328 aaPredicted RBP10.41□□□□□ -0.74
VPS11-203ENST00000529545 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
VPS11-203ENST00000529545 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
VPS11-203ENST00000529545 METTL7BQ6UX53 244 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 BMP8AQ7Z5Y6 402 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms